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PDBsum entry 1bf2

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Tunnel analysis for: 1bf2 calculated with MOLE 2.0 PDB id
1bf2
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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8 tunnels, coloured by tunnel radius 8 tunnels, coloured by tunnel radius 8 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.59 1.59 15.5 -1.91 -0.31 16.3 80 2 1 1 0 2 0 0  
2 1.48 1.57 18.2 -1.62 -0.10 20.8 76 2 1 0 1 3 0 0  
3 1.60 1.60 19.2 -0.85 -0.29 13.4 88 2 2 2 2 1 0 0  
4 1.58 1.58 19.8 -1.17 -0.26 14.2 88 2 1 2 1 1 0 0  
5 1.56 1.56 20.1 -0.84 -0.25 12.6 88 2 1 2 1 1 0 0  
6 1.48 1.59 21.8 -0.77 -0.18 15.7 84 2 2 1 3 2 0 0  
7 1.48 1.58 22.8 -0.80 -0.12 16.6 83 2 1 1 2 2 0 0  
8 1.41 1.48 16.5 -1.06 -0.24 7.6 76 2 1 2 1 1 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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