PDBsum entry 1bdy Go to PDB code:  Pore analysis for: 1bdy calculated with MOLE 2.0 PDB id 1bdy Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   2 pores, coloured by radius 2 pores, coloured by radius 2 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.94 2.26 25.4 -2.00 -0.42 23.1 80 3 3 3 2 1 1 0   2 1.16 1.30 29.0 -1.96 -0.70 21.6 83 2 3 4 2 0 0 1   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.