PDBsum entry 1b9x Go to PDB code:  Tunnel analysis for: 1b9x calculated with MOLE 2.0 PDB id 1b9x Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   6 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.23 2.28 18.3 -1.25 -0.37 23.5 86 3 3 0 3 0 0 0   2 1.27 2.09 18.6 -1.96 -0.36 30.6 86 4 2 0 1 0 0 0   3 1.24 2.24 28.4 -1.01 -0.32 17.6 86 3 3 1 5 0 0 0   4 1.26 1.40 35.0 -0.72 -0.53 9.3 78 3 1 4 1 2 3 2   5 1.12 1.57 15.2 0.52 0.14 10.6 79 1 1 2 4 1 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.