PDBsum entry 1b8d Go to PDB code:  Pore analysis for: 1b8d calculated with MOLE 2.0 PDB id 1b8d Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   1 pore, coloured by radius 5 pores, coloured by radius 5 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 2.22 2.63 41.8 -1.43 -0.24 23.7 81 5 1 0 5 1 1 0  MEN 72 B PEB 203 B UNK 3 G 2 2.03 2.02 42.7 -1.05 -0.22 15.1 77 3 1 2 2 2 0 1  UNK 100 G PEB 208 L 3 2.03 2.05 44.5 -0.73 0.08 13.3 76 4 0 1 4 2 1 1  UNK 100 G MEN 72 L PEB 208 L 4 2.06 2.21 64.1 -1.23 -0.32 21.1 75 5 1 1 5 1 1 2  UNK 100 G MEN 72 L PEB 208 L 5 1.95 2.90 87.7 -0.98 -0.35 20.0 84 8 6 3 7 2 0 1   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.