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PDBsum entry 1b1f
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Pore analysis for: 1b1f calculated with  MOLE 2.0
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PDB id
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1b1f
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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18 pores,
coloured by radius |
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17 pores,
coloured by radius
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17 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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2.18 |
2.18 |
26.2 |
-0.40 |
-0.80 |
3.4 |
0 |
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0 |
0 |
0 |
0 |
0 |
0 |
0 |
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2 |
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2.36 |
2.36 |
26.8 |
-0.40 |
-0.80 |
3.4 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
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3 |
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2.36 |
2.36 |
27.0 |
-0.40 |
-0.80 |
3.4 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
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4 |
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1.81 |
1.81 |
27.1 |
-0.40 |
-0.80 |
3.4 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
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5 |
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2.81 |
2.81 |
34.2 |
-0.40 |
-0.80 |
3.4 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
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6 |
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1.49 |
1.49 |
38.2 |
-0.40 |
-0.80 |
3.4 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
G 13 T G 14 T C 15 T
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7 |
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2.67 |
2.67 |
44.5 |
-0.40 |
-0.80 |
3.4 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
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8 |
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2.68 |
2.68 |
48.2 |
-0.40 |
-0.80 |
3.4 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
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9 |
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1.53 |
1.53 |
49.1 |
-0.40 |
-0.80 |
3.4 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
G 13 T G 14 T C 15 T
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10 |
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2.85 |
2.85 |
50.5 |
-0.40 |
-0.80 |
3.4 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
A 21 P C 4 T
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11 |
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2.76 |
2.76 |
52.9 |
-0.40 |
-0.80 |
3.4 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
A 21 P C 4 T
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12 |
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1.44 |
1.44 |
65.9 |
-0.40 |
-0.80 |
3.4 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
G 13 T G 14 T C 15 T
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13 |
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2.64 |
2.64 |
71.3 |
-0.40 |
-0.80 |
3.4 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
A 21 P C 4 T
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14 |
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1.44 |
1.44 |
73.8 |
-0.40 |
-0.80 |
3.4 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
A 10 T C 11 T G 13 T G 14 T C 15 T
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15 |
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1.84 |
1.84 |
78.7 |
-0.40 |
-0.80 |
3.4 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
AVP 950 C 20 P A 21 P C 4 T T 5 T G 7 T C 9 T A
10 T C 11 T G 13 T G 14 T C 15 T
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16 |
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2.04 |
2.04 |
110.3 |
-0.40 |
-0.80 |
3.4 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
C 19 P C 20 P G 7 T G 8 T C 9 T A 10 T
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17 |
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1.40 |
1.40 |
117.5 |
-0.40 |
-0.80 |
3.4 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
C 20 P G 7 T G 8 T C 9 T A 10 T C 11 T G 13 T G
14 T C 15 T
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program