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Ligand clusters for UniProt code P29957

Ligand clusters for P29957: Alpha-amylase OS=Pseudoalteromonas haloplanktis GN=amy PE=1 SV=3

3 ligand clusters
Cluster 1.
4 ligand types
6 ligands
Cluster 2.
2 ligand types
8 ligands
Cluster 3.
1 ligand type
9 ligands
Representative protein: 1aqhA  
 

Structures

PDB   Schematic diagram
1aqhA    
1jd7A    
1l0pA    
1kxhA    
1g9hA    
 more ...

 

 Cluster 1 contains 4 ligand types

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Ligand Description


 
1. Ligand: ACR × 1
acarbose
Alpha-Acarbose
PDB code: 1kxh(A).


 
2. Ligand: TRS × 3
2-Amino-2-Hydroxymethyl-Propane-1,3-Diol
PDB codes: 1aqm(A), 1g94(A), 1g9h(A).


 
3. Ligand: DAF-BGC × 1
DAF=1,4-Deoxy-4-((5-Hydroxymethyl-2,3,4-Trihydroxycyclohex- 5-Enyl)amino)fructose, BGC=Beta-D-Glucose.
PDB code: 1g9h(A).


 
4. Ligand: DAF-GLC-DAF-GLC-GLC × 1
DAF=1,4-Deoxy-4-((5-Hydroxymethyl-2,3,4- Trihydroxycyclohex-5-Enyl)amino)fructose, GLC=Alpha-D-Glucose.
PDB code: 1g94(A).

 

 Cluster 2 contains 2 ligand types

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Ligand Description


 
1. Ligand: NO3 × 1
Nitrate ion
PDB code: 1l0p(A).

_Cl
 
2. Metal: _CL × 7
PDB codes: 1aqh(A), 1aqm(A), 1b0i(A), 1g94(A), 1g9h(A), 1jd7(A), 1kxh(A).

 

 Cluster 3 contains 1 ligand type

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Ligand Description

_Ca
 
1. Metal: _CA × 9
PDB codes: 1aqh(A), 1aqm(A), 1b0i(A), 1g94(A), 1g9h(A), 1jd7(A), 1jd9(A), 1kxh(A), 1l0p(A).

 

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