PDBsum entry 1azt Go to PDB code:  Tunnel analysis for: 1azt calculated with MOLE 2.0 PDB id 1azt Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.28 1.28 26.9 -0.95 -0.34 18.4 81 3 4 2 5 1 0 0   2 1.28 1.28 30.4 -0.87 -0.48 13.1 86 1 4 3 5 0 0 0  GSP 413 A 3 1.28 1.28 31.8 -1.05 -0.42 15.5 80 3 4 3 4 2 0 0  PO4 407 A 4 1.28 1.28 43.8 -1.17 -0.46 18.8 87 5 2 3 6 1 0 0  PO4 406 A GSP 413 A Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.