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PDBsum entry 1awm

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Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 1awm calculated with MOLE 2.0 PDB id
1awm
Pores calculated on whole structure Pores calculated excluding ligands

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4 pores, coloured by radius 4 pores, coloured by radius 4 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.74 1.74 39.4 -1.23 -0.21 16.7 75 3 1 2 1 2 0 1  
2 1.40 2.80 73.1 -0.64 0.01 21.8 86 7 6 5 3 2 1 0  ATP 1 MG 2 ATP 3
3 1.42 2.80 110.6 -0.97 -0.04 24.0 80 11 8 3 5 4 2 0  ATP 1 MG 2 ATP 3
4 1.36 1.45 59.9 1.71 0.79 5.5 72 1 0 0 10 4 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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