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PDBsum entry 1avg
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Tunnel analysis for: 1avg calculated with  MOLE 2.0
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PDB id
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1avg
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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6 tunnels,
coloured by tunnel radius |
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6 tunnels,
coloured by
tunnel radius
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6 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.40 |
1.54 |
21.4 |
-1.68 |
-0.70 |
22.3 |
85 |
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4 |
4 |
1 |
0 |
1 |
0 |
0 |
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2 |
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1.39 |
1.53 |
21.5 |
-1.77 |
-0.73 |
23.1 |
85 |
4 |
4 |
1 |
0 |
1 |
0 |
0 |
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3 |
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1.39 |
1.54 |
22.7 |
-1.29 |
-0.50 |
16.8 |
76 |
2 |
3 |
2 |
0 |
3 |
0 |
0 |
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4 |
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1.39 |
1.54 |
22.8 |
-1.32 |
-0.53 |
17.7 |
76 |
2 |
3 |
2 |
0 |
3 |
0 |
0 |
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5 |
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1.33 |
1.49 |
23.4 |
-0.95 |
-0.30 |
15.3 |
77 |
2 |
2 |
2 |
3 |
3 |
0 |
0 |
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6 |
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1.33 |
1.48 |
25.8 |
-1.20 |
-0.66 |
17.4 |
82 |
4 |
3 |
0 |
2 |
1 |
0 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program