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PDBsum entry 1aqh

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Tunnel analysis for: 1aqh calculated with MOLE 2.0 PDB id
1aqh
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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3 tunnels, coloured by tunnel radius 3 tunnels, coloured by tunnel radius 3 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.20 2.84 28.0 -0.84 0.06 21.7 81 2 2 2 3 3 0 0  CL 900 A
2 1.20 3.85 32.9 -0.40 0.11 20.1 74 2 2 2 4 4 0 0  CL 900 A
3 1.22 1.23 17.6 -2.22 -0.71 17.5 82 1 2 2 1 0 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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