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PDBsum entry 1al2

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 1al2 calculated with MOLE 2.0 PDB id
1al2
Pores calculated on whole structure Pores calculated excluding ligands

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4 pores, coloured by radius 6 pores, coloured by radius 6 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.95 2.02 42.2 0.09 0.02 5.9 84 0 2 4 3 3 1 0  
2 1.49 1.49 50.0 -0.87 -0.41 13.1 83 3 4 4 4 5 1 1  SPH 0 1
3 1.50 2.17 63.3 0.00 0.10 9.7 79 2 4 2 11 8 1 1  SPH 0 1
4 1.23 1.31 115.9 -0.42 0.01 11.8 81 4 3 3 10 5 1 0  SPH 0 1
5 1.23 1.31 126.5 -1.22 -0.45 14.5 83 4 3 5 6 4 1 0  SPH 0 1
6 1.15 1.16 65.8 -1.29 -0.52 12.8 87 5 4 6 4 1 3 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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