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PDBsum entry 1aja

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Top Page protein Protein-protein interface(s) clefts links
Cleft analysis for: 1aja PDB id
1aja
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Binding-site(s)
Binding-surface(s)
Coloured by
 cleft (as in table below)
 closest atom type
 residue type
 residue conservation
Clefts
R1
ratio
Accessible
vertices
Buried
vertices
Average
depth
Residue..type
Ligands
Volume
1 8742.52 5.87 66.34 3 9.83 2 14.00 1 26 24 37 36 11 33 2  
2 1490.06 0.00 63.12 4 5.69 10 7.15 9 4 5 8 6 4 7 1  
3 1447.88 0.00 62.94 5 7.78 8 6.59 10 4 5 7 6 4 7 1  
4 989.72 0.00 56.06 9 9.46 3 9.95 4 5 4 4 3 1 3 0  
5 755.58 0.00 61.47 7 8.37 5 10.05 2 3 3 3 2 0 4 0  
6 1004.48 0.00 69.76 2 10.59 1 7.58 8 3 5 8 9 0 3 0  
7 777.52 0.00 62.92 6 8.05 7 9.66 5 4 4 3 1 2 1 0  
8 679.64 0.00 60.48 8 8.68 4 9.48 6 3 3 5 5 0 1 0  
9 700.31 0.00 55.82 10 7.69 9 8.83 7 0 2 7 4 1 3 0  
10 838.69 0.00 72.94 1 8.12 6 9.97 3 3 5 7 7 0 2 0  
 Protein structure

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C
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