PDBsum entry 1agn Go to PDB code:  Pore analysis for: 1agn calculated with MOLE 2.0 PDB id 1agn Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 pores, coloured by radius 7 pores, coloured by radius 7 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.48 1.68 26.9 -2.37 -0.51 23.8 82 6 2 3 0 2 0 0   2 1.93 2.02 28.4 -1.39 -0.45 9.1 82 3 1 4 3 0 3 0   3 1.90 4.30 35.8 0.88 0.27 9.4 83 2 1 0 10 2 0 2  NAD 377 C ACT 378 C ZN 401 C 4 1.87 1.91 45.4 0.67 0.17 9.7 83 3 2 0 10 2 1 2  NAD 377 D ACT 378 D ZN 401 D ACT 501 D 5 3.00 5.08 54.3 -2.17 -0.56 25.1 73 6 2 0 1 1 2 0   6 2.02 4.02 47.2 0.51 0.11 10.1 85 3 3 1 11 2 1 2  NAD 377 B ACT 378 B ZN 401 B ACT 501 B 7 1.76 2.75 49.8 0.72 0.22 10.3 88 3 3 1 10 2 0 1  NAD 377 A ACT 378 A ZN 401 A ACT 501 A Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.