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PDBsum entry 1a7a

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Top Page protein ligands Protein-protein interface(s) tunnels links
Tunnel analysis for: 1a7a calculated with MOLE 2.0 PDB id
1a7a
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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8 tunnels, coloured by tunnel radius 3 tunnels, coloured by tunnel radius 3 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.57 1.59 31.0 0.64 0.12 8.7 84 3 1 0 6 2 0 1  MSE 262 B MSE 290 B
2 1.58 1.62 54.1 0.16 0.08 11.2 85 5 1 1 9 3 0 1  MSE 262 B MSE 290 B NAD 434 B
3 1.56 1.69 82.8 -0.13 -0.11 13.9 83 6 7 2 13 4 0 2  MSE 29 B MSE 33 B MSE 262 B MSE 290 B MSE 358 B N
AD 434 B ADC 436 B

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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