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PDBsum entry 1a5a

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Top Page protein ligands metals Protein-protein interface(s) clefts links
Cleft analysis for: 1a5a PDB id
1a5a
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Binding-site(s)
Binding-surface(s)
Coloured by
 cleft (as in table below)
 closest atom type
 residue type
 residue conservation
Clefts
R1
ratio
Accessible
vertices
Buried
vertices
Average
depth
Residue..type
Ligands
Volume
1 5865.75 1.32 71.79 2 12.72 1 17.03 1 14 17 27 27 9 24 2 PLP 501[B] (14 atoms)
2 4433.48 0.00 69.16 3 10.60 3 14.26 2 3 11 14 29 10 13 1  
3 1264.78 0.00 64.21 5 12.22 2 10.06 3 5 1 3 11 1 3 0  
4 1266.47 0.00 59.14 9 9.29 5 8.70 5 5 4 2 7 3 4 0  
5 1315.41 0.00 60.33 8 6.70 9 6.81 8 5 6 6 11 0 4 0  
6 688.08 0.00 68.22 4 10.07 4 7.34 6 3 3 2 3 2 1 0  
7 925.17 0.00 61.69 7 7.73 8 6.04 10 5 5 4 7 0 3 0  
8 544.22 0.00 73.66 1 8.42 6 9.23 4 1 2 3 8 2 2 0  
9 622.69 0.00 58.89 10 4.71 10 7.24 7 4 2 3 4 2 0 0  
10 596.53 0.00 63.09 6 8.16 7 6.53 9 3 3 6 3 0 1 1  
 Protein structure

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C
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