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PDBsum entry 1a1v
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Tunnel analysis for: 1a1v calculated with  MOLE 2.0
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PDB id
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1a1v
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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4 tunnels,
coloured by tunnel radius |
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5 tunnels,
coloured by
tunnel radius
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5 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.39 |
1.45 |
21.9 |
-1.61 |
-0.62 |
21.3 |
90 |
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3 |
3 |
1 |
2 |
0 |
0 |
0 |
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CME 431 A
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2 |
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1.37 |
1.42 |
32.5 |
-1.55 |
-0.78 |
14.8 |
92 |
2 |
3 |
4 |
2 |
1 |
1 |
0 |
CME 431 A DU 4 B DU 5 B DU 6 B DU 7 B
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3 |
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1.29 |
1.29 |
39.6 |
-1.60 |
-0.73 |
20.4 |
87 |
2 |
4 |
1 |
2 |
1 |
1 |
0 |
CME 431 A DU 4 B DU 5 B DU 6 B DU 7 B DU 8 B
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4 |
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1.11 |
1.18 |
65.2 |
-1.43 |
-0.63 |
13.7 |
88 |
4 |
3 |
3 |
5 |
2 |
2 |
0 |
CME 431 A DU 4 B DU 5 B DU 6 B DU 7 B DU 8 B
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5 |
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1.24 |
1.42 |
17.8 |
2.10 |
0.84 |
9.1 |
80 |
1 |
1 |
0 |
7 |
1 |
1 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program