PDBsum entry 1a0d Go to PDB code:  Pore analysis for: 1a0d calculated with MOLE 2.0 PDB id 1a0d Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   16 pores, coloured by radius 16 pores, coloured by radius 16 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.53 1.96 69.1 -1.31 -0.11 25.9 77 10 12 2 10 4 0 0   2 1.53 1.93 69.3 -1.34 -0.14 26.5 77 10 12 2 10 4 0 0   3 1.54 1.95 83.9 -1.59 -0.33 24.0 78 10 12 3 6 3 4 0   4 1.59 2.05 86.5 -1.33 -0.39 19.5 78 9 12 4 6 3 4 0   5 1.53 1.93 90.0 -1.42 -0.38 20.6 77 9 12 3 6 3 4 0   6 1.46 1.91 91.2 -1.61 -0.34 23.9 78 10 12 3 6 3 4 0   7 1.56 2.06 96.4 -1.59 -0.14 24.5 73 14 18 2 10 6 2 0   8 1.46 1.81 97.7 -1.57 -0.11 23.4 73 14 18 2 10 6 2 0   9 1.68 2.06 103.1 -1.63 -0.37 24.5 79 12 15 5 8 3 4 0   10 1.70 2.04 105.9 -1.42 -0.41 20.8 79 11 15 6 8 3 4 0   11 1.67 1.99 110.3 -1.51 -0.40 22.6 79 11 15 5 8 3 4 0   12 1.74 1.69 111.4 -1.65 -0.36 25.4 79 12 15 5 8 3 4 0   13 1.58 2.04 116.7 -1.66 -0.19 25.5 75 16 21 4 12 6 2 0   14 1.65 2.12 117.9 -1.65 -0.19 24.7 75 16 21 4 12 6 2 0   15 1.31 2.86 124.6 -1.09 -0.21 22.3 80 14 16 5 13 5 3 0   16 2.31 2.51 142.3 -1.78 -0.49 23.2 80 14 18 7 6 2 8 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.