 |
PDBsum entry 1a02
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
|
|
|
|
|
|
|
|
|
|
Tunnel analysis for: 1a02 calculated with MOLE 2.0
|
PDB id
|
|
|
|
1a02
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
Tunnels calculated on whole structure |
 |
Tunnels calculated excluding ligands
|
|
|
 |
 |
 |
 |
 |
|
 |
|
|
|
 |
 |
|
 |
|
|
|
 |
6 tunnels,
coloured by tunnel radius |
 |
6 tunnels,
coloured by
tunnel radius
|
6 tunnels,
coloured as in list below
|
|
|
 |
 |
 |
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
|
|
 |
|
|
|
 |
Free R
|
 |
|
|
|
|
 |
Length
|
 |
|
|
|
|
 |
HPathy
|
 |
|
|
|
|
 |
HPhob
|
 |
|
|
|
|
 |
Polar
|
 |
|
|
|
|
 |
Rel Mut
|
 |
|
|
|
|
 |
Residue..type
|
 |
|
|
|
|
 |
Ligands
|
 |
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.28 |
1.52 |
25.2 |
-1.89 |
-0.63 |
17.3 |
82 |
 |
2 |
1 |
3 |
0 |
2 |
0 |
0 |
 |
DA 4005 A DA 4006 A DA 5014 B DT 5015 B DT 5016 B DT 5017 B
|
 |
 |
2 |
 |
1.17 |
1.29 |
43.4 |
-2.34 |
-0.53 |
27.0 |
86 |
7 |
1 |
5 |
2 |
1 |
0 |
0 |
DT 4013 A DT 4014 A DT 5016 B
|
 |
3 |
 |
1.18 |
1.28 |
46.6 |
-1.92 |
-0.62 |
17.9 |
85 |
4 |
3 |
6 |
2 |
1 |
1 |
0 |
DT 5016 B
|
 |
4 |
 |
1.18 |
1.29 |
56.9 |
-1.64 |
-0.33 |
24.8 |
82 |
10 |
3 |
4 |
3 |
1 |
0 |
0 |
DT 4011 A DG 4012 A DT 5016 B
|
 |
5 |
 |
1.17 |
1.30 |
60.5 |
-1.52 |
-0.32 |
22.4 |
84 |
9 |
1 |
4 |
5 |
1 |
0 |
0 |
DG 4012 A DT 5006 B DG 5007 B DT 5016 B
|
 |
6 |
 |
1.19 |
1.21 |
70.0 |
-1.89 |
-0.51 |
22.9 |
86 |
10 |
1 |
4 |
3 |
1 |
0 |
0 |
DG 4012 A DT 4013 A DA 5009 B DA 5010 B DT 5016 B
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
Residue-type_colouring |
 |
|
 |
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
 |