spacer
spacer

PDBsum entry 1rjm

Go to PDB code: 
protein ligands Protein-protein interface(s) links
Lyase PDB id
1rjm
Jmol
Contents
Protein chains
239 a.a. *
Ligands
EP1
Waters ×212
* Residue conservation analysis
PDB id:
1rjm
Name: Lyase
Title: Crystal structure of menb (rv0548c) from mycobacterium tuber
Structure: Menb. Chain: a, b, c. Engineered: yes
Source: Mycobacterium tuberculosis. Organism_taxid: 1773. Gene: menb. Expressed in: escherichia coli. Expression_system_taxid: 562.
Biol. unit: Hexamer (from PDB file)
Resolution:
2.15Å     R-factor:   0.203     R-free:   0.231
Authors: J.M.Johnston,V.L.Arcus,E.N.Baker,Tb Structural Genomics Cons (Tbsgc)
Key ref: J.M.Johnston et al. Crystal structure of menb (rv0548c) from mycobacterium tuberculosis. To be published, .
Date:
19-Nov-03     Release date:   30-Nov-04    
PROCHECK
Go to PROCHECK summary
 Headers
 References

Protein chains
Pfam  
P9WNP5  (MENB_MYCTU) -  1,4-dihydroxy-2-naphthoyl-CoA synthase
Seq:
Struc:
314 a.a.
239 a.a.
Key:    Secondary structure  CATH domain

 Enzyme reactions 
   Enzyme class: E.C.4.1.3.36  - 1,4-dihydroxy-2-naphthoyl-CoA synthase.
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]

      Pathway:
Vitamin K Biosynthesis
      Reaction: 4-(2-carboxyphenyl)-4-oxobutanoyl-CoA = 1,4-dihydroxy-2-naphthoyl-CoA + H2O
4-(2-carboxyphenyl)-4-oxobutanoyl-CoA
= 1,4-dihydroxy-2-naphthoyl-CoA
+ H(2)O
Molecule diagrams generated from .mol files obtained from the KEGG ftp site
 Gene Ontology (GO) functional annotation 
  GO annot!
  Cellular component     plasma membrane   1 term 
  Biological process     metabolic process   3 terms 
  Biochemical function     catalytic activity     3 terms