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PDBsum entry 1pzv

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protein links
Ligase PDB id
1pzv
Jmol
Contents
Protein chain
152 a.a. *
Waters ×41
* Residue conservation analysis
PDB id:
1pzv
Name: Ligase
Title: Crystal structures of two ubc (e2) enzymes of the ubiquitin- conjugating system in caenorhabditis elegans
Structure: Probable ubiquitin-conjugating enzyme e2-19 kda. Chain: a. Synonym: ubiquitin-protein ligase, ubiquitin carrier protein. Engineered: yes
Source: Caenorhabditis elegans. Organism_taxid: 6239. Gene: f58a4.10. Expressed in: escherichia coli bl21(de3). Expression_system_taxid: 469008.
Resolution:
2.52Å     R-factor:   0.241     R-free:   0.289
Authors: N.Schormann,G.Lin,S.Li,J.Symersky,S.Qiu,J.Finley,D.Luo, A.Stanton,M.Carson,M.Luo,Southeast Collaboratory For Structural Genomics (Secsg)
Key ref: N.Schormann et al. Crystal structures of two ubc (e2) enzymes of the ubiquitin-Conjugating system in caenorhabditis elegans. To be published, .
Date:
14-Jul-03     Release date:   22-Jul-03    
PROCHECK
Go to PROCHECK summary
 Headers
 References

Protein chain
Pfam   ArchSchema ?
P34477  (UBC7_CAEEL) -  Probable ubiquitin-conjugating enzyme E2 7
Seq:
Struc:
164 a.a.
152 a.a.
Key:    PfamA domain  Secondary structure  CATH domain

 Enzyme reactions 
   Enzyme class: E.C.6.3.2.19  - Ubiquitin--protein ligase.
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]
      Reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine
ATP
+ ubiquitin
+ protein lysine
= AMP
+ diphosphate
+ protein N-ubiquityllysine
Molecule diagrams generated from .mol files obtained from the KEGG ftp site
 Gene Ontology (GO) functional annotation 
  GO annot!
  Biological process     protein ubiquitination   1 term 
  Biochemical function     nucleotide binding     4 terms