Your browser does not support inline frames or is currently configured not to display inline frames. Content can be viewed at actual source page: inc/head.html
EBI
Databases
Structure Databases
PDBsum
Ligand clusters for UniProt code Q9X1X7
Ligand clusters for Q9X1X7: Quinolinate synthase A from Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099)
Top 6 (of 10) ligand clusters
Cluster 1.
16 ligand types
22 ligands
Cluster 2.
4 ligand types
4 ligands
Cluster 3.
2 ligand types
4 ligands
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
2 ligand types
2 ligands
Representative protein: 4p3xA
Structures
PDB
Schematic diagram
4p3x
A
6f4d
A
6g74
A
5f35
A
5lqm
A
more ...
Cluster 1 contains 16 ligand types
Use checkboxes to select ligands to display in RasMol, Jmol, or download as an SDF file.
Selection shortcuts:
select all/none
invert selection.
Ligand
Description
_Fe
1. Metal:
_FE × 3
PDB codes:
6i0r
(A),
2. Ligand:
SF4 × 3
Iron/sulfur cluster
PDB codes:
4p3x
(A),
6f4l
(A),
6g74
(A).
3. Ligand:
SF4-FLC × 2
SF4
=Iron/sulfur cluster,
FLC
=Citrate anion.
PDB codes:
5f35
(A),
5lqm
(A).
4. Ligand:
SF4-PGH × 2
SF4
=Iron/sulfur cluster,
PGH
=Phosphoglycolohydroxamic acid.
PDB codes:
5f33
(A),
6f4d
(A).
5. Ligand:
NTM × 1
Quinolinic acid
PDB code:
6f4l
(A).
6. Ligand:
PHT × 1
Phthalic acid
PDB code:
6g74
(A).
7. Ligand:
PO4 × 1
Phosphate ion
PDB code:
6f4d
(A).
8. Ligand:
QAT × 1
5-Mercaptopyridine-2,3-Dicarboxylic acid
PDB code:
6i0r
(A).
9. Ligand:
SF4-5UK × 1
SF4
=Iron/sulfur cluster,
5UK
=2-Imino,3-Carboxy,5-Oxo,6-Hydroxy hexanoic acid.
PDB code:
5f3d
(A).
10. Ligand:
SF4-GZ8 × 1
SF4
=Iron/sulfur cluster,
GZ8
=4-Mercaptoidenecyclohexa-2,5-Diene-1,2-Dicarboxylic acid.
PDB code:
6i0k
(A).
11. Ligand:
SF4-NTM × 1
SF4
=Iron/sulfur cluster,
NTM
=Quinolinic acid.
PDB code:
5lqs
(A).
12. Ligand:
SF4-QAS × 1
SF4
=Iron/sulfur cluster,
QAS
=6-Mercaptopyridine-2,3-Dicarboxylic acid.
PDB code:
6i0p
(A).
13. Ligand:
SF4-XQB × 1
SF4
=Iron/sulfur cluster,
XQB
=2-Imino,3-Carboxy,5-Hydroxy,6-Oxo hexanoic acid.
PDB code:
6f48
(A).
14. Ligand:
SO4 × 1
Sulfate ion
PDB code:
5f33
(A).
15. Ligand:
YQA × 1
5-Hydroxy,-4,5-Dihydroquinolinate
PDB code:
6f48
(A).
_Cl
16. Metal:
_CL × 1
PDB code:
5lqs
(A).
Cluster 2 contains 4 ligand types
Selection shortcuts:
select all/none
invert selection.
Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
6f48
(A).
_Mg
2. Metal:
_MG × 1
PDB code:
5f35
(A).
3. Ligand:
NHE × 1
2-[N-Cyclohexylamino]ethane sulfonic acid
PDB code:
6f4l
(A).
_Cl
4. Metal:
_CL × 1
PDB code:
6f48
(A).
Cluster 3 contains 2 ligand types
Selection shortcuts:
select all/none
invert selection.
Ligand
Description
1. Ligand:
PO4 × 2
Phosphate ion
PDB codes:
6f4d
(A),
6i0p
(A).
2. Ligand:
SO4 × 2
Sulfate ion
PDB codes:
5f33
(A),
5f3d
(A).
Cluster 4 contains 1 ligand type
Selection shortcuts:
select all/none
invert selection.
Ligand
Description
1. Ligand:
MPD × 1
(4s)-2-Methyl-2,4-Pentanediol
PDB code:
4p3x
(A).
Cluster 5 contains 1 ligand type
Selection shortcuts:
select all/none
invert selection.
Ligand
Description
1. Ligand:
MPD × 1
(4s)-2-Methyl-2,4-Pentanediol
PDB code:
4p3x
(A).
Cluster 6 contains 2 ligand types
Selection shortcuts:
select all/none
invert selection.
Ligand
Description
_Zn
1. Metal:
_ZN × 1
PDB code:
4p3x
(A).
2. Ligand:
PO4 × 1
Phosphate ion
PDB code:
6i0k
(A).