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Ligand clusters for UniProt code Q9X1X7

Ligand clusters for Q9X1X7: Quinolinate synthase A from Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099)

Top 6 (of 10) ligand clusters
Cluster 1.
16 ligand types
22 ligands
Cluster 2.
4 ligand types
4 ligands
Cluster 3.
2 ligand types
4 ligands
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
2 ligand types
2 ligands
Representative protein: 4p3xA  
JSmol
 

Structures

PDB   Schematic diagram
4p3xA    
6f4dA    
6g74A    
5f35A    
5lqmA    
 more ...

 

 Cluster 1 contains 16 ligand types

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Ligand Description

_Fe
 
1. Metal: _FE × 3
PDB codes: 6i0r(A),


 
2. Ligand: SF4 × 3
Iron/sulfur cluster
PDB codes: 4p3x(A), 6f4l(A), 6g74(A).


 
3. Ligand: SF4-FLC × 2
SF4=Iron/sulfur cluster, FLC=Citrate anion.
PDB codes: 5f35(A), 5lqm(A).


 
4. Ligand: SF4-PGH × 2
SF4=Iron/sulfur cluster, PGH=Phosphoglycolohydroxamic acid.
PDB codes: 5f33(A), 6f4d(A).


 
5. Ligand: NTM × 1
Quinolinic acid
PDB code: 6f4l(A).


 
6. Ligand: PHT × 1
Phthalic acid
PDB code: 6g74(A).


 
7. Ligand: PO4 × 1
Phosphate ion
PDB code: 6f4d(A).


 
8. Ligand: QAT × 1
5-Mercaptopyridine-2,3-Dicarboxylic acid
PDB code: 6i0r(A).


 
9. Ligand: SF4-5UK × 1
SF4=Iron/sulfur cluster, 5UK=2-Imino,3-Carboxy,5-Oxo,6-Hydroxy hexanoic acid.
PDB code: 5f3d(A).


 
10. Ligand: SF4-GZ8 × 1
SF4=Iron/sulfur cluster, GZ8=4-Mercaptoidenecyclohexa-2,5-Diene-1,2-Dicarboxylic acid.
PDB code: 6i0k(A).


 
11. Ligand: SF4-NTM × 1
SF4=Iron/sulfur cluster, NTM=Quinolinic acid.
PDB code: 5lqs(A).


 
12. Ligand: SF4-QAS × 1
SF4=Iron/sulfur cluster, QAS=6-Mercaptopyridine-2,3-Dicarboxylic acid.
PDB code: 6i0p(A).


 
13. Ligand: SF4-XQB × 1
SF4=Iron/sulfur cluster, XQB=2-Imino,3-Carboxy,5-Hydroxy,6-Oxo hexanoic acid.
PDB code: 6f48(A).


 
14. Ligand: SO4 × 1
Sulfate ion
PDB code: 5f33(A).


 
15. Ligand: YQA × 1
5-Hydroxy,-4,5-Dihydroquinolinate
PDB code: 6f48(A).

_Cl
 
16. Metal: _CL × 1
PDB code: 5lqs(A).

 

 Cluster 2 contains 4 ligand types

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 6f48(A).

_Mg
 
2. Metal: _MG × 1
PDB code: 5f35(A).


 
3. Ligand: NHE × 1
2-[N-Cyclohexylamino]ethane sulfonic acid
PDB code: 6f4l(A).

_Cl
 
4. Metal: _CL × 1
PDB code: 6f48(A).

 

 Cluster 3 contains 2 ligand types

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Ligand Description


 
1. Ligand: PO4 × 2
Phosphate ion
PDB codes: 6f4d(A), 6i0p(A).


 
2. Ligand: SO4 × 2
Sulfate ion
PDB codes: 5f33(A), 5f3d(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: MPD × 1
(4s)-2-Methyl-2,4-Pentanediol
PDB code: 4p3x(A).

 

 Cluster 5 contains 1 ligand type

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Ligand Description


 
1. Ligand: MPD × 1
(4s)-2-Methyl-2,4-Pentanediol
PDB code: 4p3x(A).

 

 Cluster 6 contains 2 ligand types

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Ligand Description

_Zn
 
1. Metal: _ZN × 1
PDB code: 4p3x(A).


 
2. Ligand: PO4 × 1
Phosphate ion
PDB code: 6i0k(A).

 

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