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Ligand clusters for UniProt code Q9UBG0

Ligand clusters for Q9UBG0: C-type mannose receptor 2 from Homo sapiens

Top 6 (of 7) ligand clusters
Cluster 1.
2 ligand types
2 ligands
Cluster 2.
3 ligand types
3 ligands
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
4 ligands
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
1 ligand
Representative protein: 5ew6A  
JSmol
 

Structures

PDB   Schematic diagram
5ew6A    
5ao5A    
5e4lA    
5e4kA    
5e4lB    

 

 Cluster 1 contains 2 ligand types

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Ligand Description


 
1. Ligand: NAG × 1
n-acetylglucosamine
2-Acetamido-2-Deoxy-Beta-D-Glucopyranose
PDB code: 5e4k(A).


 
2. Ligand: NAG-NAG-NAG × 1
NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose.
PDB code: 5ew6(A).

 

 Cluster 2 contains 3 ligand types

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Ligand Description


 
1. Ligand: 1PE × 1
Pentaethylene glycol
PDB code: 5ew6(A).


 
2. Ligand: PE5 × 1
3,6,9,12,15,18,21,24-Octaoxahexacosan-1-Ol
PDB code: 5e4k(A).


 
3. Ligand: SO4 × 1
Sulfate ion
PDB code: 5ao5(A).

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: 1PE × 1
Pentaethylene glycol
PDB code: 5e4k(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: NAG × 4
n-acetylglucosamine
2-Acetamido-2-Deoxy-Beta-D-Glucopyranose
PDB codes: 5e4k(A), 5e4l(A), 5ew6(A).

 

 Cluster 5 contains 1 ligand type

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Ligand Description


 
1. Ligand: SO4 × 1
Sulfate ion
PDB code: 5ao5(A).

 

 Cluster 6 contains 1 ligand type

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Ligand Description

_Na
 
1. Metal: _NA × 1
PDB code: 5ao5(A).

 

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