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EBI
Databases
Structure Databases
PDBsum
Ligand clusters for UniProt code Q9U3P2
Ligand clusters for Q9U3P2: Synaptogenesis protein syg-2 from Caenorhabditis elegans
Top 6 (of 9) ligand clusters
Cluster 1.
1 ligand type
1 ligand
Cluster 2.
2 ligand types
3 ligands
Cluster 3.
1 ligand type
2 ligands
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
2 ligands
Cluster 6.
1 ligand type
1 ligand
Representative protein: 4ofyD
Structures
PDB
Schematic diagram
4ofy
D
4ofp
A
4ofk
A
Cluster 1 contains 1 ligand type
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Ligand
Description
1. Ligand:
NAG-NAG × 1
NAG
=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose.
PDB code:
4ofy
(D).
Cluster 2 contains 2 ligand types
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Ligand
Description
1. Ligand:
NAG × 2
n-acetylglucosamine
2-Acetamido-2-Deoxy-Beta-D-Glucopyranose
PDB codes:
4ofk
(A),
4ofp
(A).
2. Ligand:
EDO × 1
1,2-Ethanediol
PDB code:
4ofk
(A).
Cluster 3 contains 1 ligand type
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Ligand
Description
1. Ligand:
NAG × 2
n-acetylglucosamine
2-Acetamido-2-Deoxy-Beta-D-Glucopyranose
PDB codes:
4ofp
(A),
4ofy
(D).
Cluster 4 contains 1 ligand type
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Ligand
Description
1. Ligand:
NAG × 1
n-acetylglucosamine
2-Acetamido-2-Deoxy-Beta-D-Glucopyranose
PDB code:
4ofp
(A).
Cluster 5 contains 1 ligand type
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Ligand
Description
1. Ligand:
NAG × 2
n-acetylglucosamine
2-Acetamido-2-Deoxy-Beta-D-Glucopyranose
PDB codes:
4ofp
(A),
4ofy
(D).
Cluster 6 contains 1 ligand type
Selection shortcuts:
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Ligand
Description
1. Ligand:
NAG × 1
n-acetylglucosamine
2-Acetamido-2-Deoxy-Beta-D-Glucopyranose
PDB code:
4ofy
(D).