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Ligand clusters for UniProt code Q9QXC1
Ligand clusters for Q9QXC1: Fetuin-B from Mus musculus
Top 6 (of 8) ligand clusters
Cluster 1.
4 ligand types
5 ligands
Cluster 2.
1 ligand type
2 ligands
Cluster 3.
2 ligand types
5 ligands
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
2 ligands
Representative protein: 6ht9B
Structures
PDB
Schematic diagram
6ht9
B
7auw
B
7auw
D
6hpv
A
6ht9
D
Cluster 1 contains 4 ligand types
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Ligand
Description
1. Ligand:
NAG × 2
n-acetylglucosamine
2-Acetamido-2-Deoxy-Beta-D-Glucopyranose
PDB codes:
6hpv
(A),
6ht9
(D).
2. Ligand:
NAG-FUC-NAG × 1
NAG
=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose,
FUC
=Alpha-L-Fucopyranose.
PDB code:
7auw
(D).
3. Ligand:
NAG-NAG × 1
NAG
=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose.
PDB code:
6ht9
(B).
4. Ligand:
NAG-NAG-BMA-FUC × 1
NAG
=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose,
BMA
=Beta-D-Mannopyranose,
FUC
=Alpha-L-Fucopyranose.
PDB code:
7auw
(B).
Cluster 2 contains 1 ligand type
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Ligand
Description
1. Ligand:
NAG-NAG-BMA-MAN-MAN-FUC-FUC × 2
NAG
=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose,
BMA
=Beta-D-Mannopyranose,
MAN
=Alpha-D-Mannopyranose,
FUC
=Alpha-L-Fucopyranose.
PDB codes:
7auw
(B),
Cluster 3 contains 2 ligand types
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Ligand
Description
1. Ligand:
NAG × 4
n-acetylglucosamine
2-Acetamido-2-Deoxy-Beta-D-Glucopyranose
PDB codes:
6hpv
(A),
6ht9
(B),
7auw
(B).
2. Ligand:
NAG-NAG-BMA × 1
NAG
=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose,
BMA
=Beta-D-Mannopyranose.
PDB code:
7auw
(D).
Cluster 4 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
6ht9
(B).
Cluster 5 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
6ht9
(B).
Cluster 6 contains 1 ligand type
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Ligand
Description
1. Ligand:
SO4 × 2
Sulfate ion
PDB codes:
7auw
(B),