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EBI
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PDBsum
Ligand clusters for UniProt code Q9NVD7
Ligand clusters for Q9NVD7: Alpha-parvin from Homo sapiens
Top 6 (of 14) ligand clusters
Cluster 1.
1 ligand type
1 ligand
Cluster 2.
3 ligand types
4 ligands
Cluster 3.
2 ligand types
2 ligands
Cluster 4.
2 ligand types
2 ligands
Cluster 5.
2 ligand types
2 ligands
Cluster 6.
2 ligand types
2 ligands
Representative protein: 2k2rA
Structures
PDB
Schematic diagram
2k2r
A
2vzc
A
2vzg
B
2vzd
A
2vzi
B
Cluster 1 contains 1 ligand type
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Ligand
Description
1. Ligand:
ASP-LEU-ASP-ALA-LEU-LEU-ALA-ASP-LEU-GLU × 1
PDB code:
2k2r
(A).
Cluster 2 contains 3 ligand types
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
2vzc
(A).
2. Ligand:
EDO × 2
1,2-Ethanediol
PDB codes:
2vzd
(A),
2vzg
(B).
3. Ligand:
PGE × 1
Triethylene glycol
PDB code:
2vzi
(B).
Cluster 3 contains 2 ligand types
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
2vzd
(A).
2. Ligand:
PG4 × 1
Tetraethylene glycol
PDB code:
2vzd
(A).
Cluster 4 contains 2 ligand types
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Ligand
Description
1. Ligand:
MRD × 1
(4r)-2-Methylpentane-2,4-Diol
PDB code:
2vzc
(A).
2. Ligand:
PGE × 1
Triethylene glycol
PDB code:
2vzd
(A).
Cluster 5 contains 2 ligand types
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Ligand
Description
1. Ligand:
MPD × 1
(4s)-2-Methyl-2,4-Pentanediol
PDB code:
2vzc
(A).
2. Ligand:
PGE × 1
Triethylene glycol
PDB code:
2vzd
(A).
Cluster 6 contains 2 ligand types
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Ligand
Description
1. Ligand:
EDO × 1
1,2-Ethanediol
PDB code:
2vzg
(B).
2. Ligand:
PG4 × 1
Tetraethylene glycol
PDB code:
2vzi
(B).