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Ligand clusters for UniProt code Q9H0U4

Ligand clusters for Q9H0U4: Ras-related protein Rab-1B from Homo sapiens

3 ligand clusters
Cluster 1.
6 ligand types
16 ligands
Cluster 2.
1 ligand type
1 ligand
Cluster 3.
1 ligand type
1 ligand
Representative protein: 4i1oA  
JSmol
 

Structures

PDB   Schematic diagram
4i1oA    
5szhB    
3nkvA    
5szkB    
4hlqB    
 more ...

 

 Cluster 1 contains 6 ligand types

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Ligand Description

_Mg
 
1. Metal: _MG × 5
PDB codes: 3nkv(A), 4hlq(B), 4i1o(A), 5szh(B), 5szk(B).


 
2. Ligand: GDP × 4
Guanosine-5'-Diphosphate
PDB codes: 5o74(B), 6sku(B).


 
3. Ligand: GNP × 3
Phosphoaminophosphonic acid-Guanylate ester
PDB codes: 3nkv(A), 5szh(B), 5szk(B).


 
4. Ligand: GDP-BEF × 2
GDP=Guanosine-5'-Diphosphate, BEF=Beryllium trifluoride ion.
PDB codes: 4hlq(B), 4i1o(A).


 
5. Ligand: PEG × 1
Di(hydroxyethyl)ether
PDB code: 4i1o(A).


 
6. Ligand: PO4 × 1
Phosphate ion
PDB code: 3jza(A).

 

 Cluster 2 contains 1 ligand type

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Ligand Description


 
1. Ligand: AMP × 1
Adenosine monophosphate
PDB code: 3nkv(A).

 

 Cluster 3 contains 1 ligand type

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Ligand Description

_Ba
 
1. Metal: _BA × 1
PDB code: 3nkv(A).

 

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