Ligand clusters for UniProt code Q9EQU3

Ligand clusters for Q9EQU3: Toll-like receptor 9 from Mus musculus

		Top 6 (of 28) ligand clusters Cluster 1. 2 ligand types 2 ligands Cluster 2. 3 ligand types 7 ligands Cluster 3. 3 ligand types 3 ligands Cluster 4. 2 ligand types 3 ligands Cluster 5. 2 ligand types 3 ligands Cluster 6. 1 ligand type 1 ligand
Representative protein: 5zlnA

Structures

PDB		Schematic diagram
5zlnA
3wpfA
3wpiA
3wpgA
3wphA
		more ...

Cluster 1 contains 2 ligand types

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Ligand		Description
		1. Ligand: NAG × 1 n-acetylglucosamine 2-Acetamido-2-Deoxy-Beta-D-Glucopyranose PDB code: 3wpf(A).
		2. Ligand: NAG-NAG-BMA × 1 NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, BMA=Beta-D-Mannopyranose. PDB code: 5zln(A).

Cluster 2 contains 3 ligand types

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Ligand		Description
		1. Ligand: NAG × 5 n-acetylglucosamine 2-Acetamido-2-Deoxy-Beta-D-Glucopyranose PDB codes: 3wpf(A), 3wpg(A), 3wph(A), 3wpi(A), 4qdh(A).
		2. Ligand: NAG-NAG × 1 NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose. PDB code: 5zln(A).
		3. Ligand: SO4 × 1 Sulfate ion PDB code: 4qdh(A).

Cluster 3 contains 3 ligand types

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Ligand		Description
		1. Ligand: NAG × 1 n-acetylglucosamine 2-Acetamido-2-Deoxy-Beta-D-Glucopyranose PDB code: 4qdh(A).
		2. Ligand: NAG-NAG × 1 NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose. PDB code: 5zln(A).
		3. Ligand: SO4 × 1 Sulfate ion PDB code: 4qdh(A).

Cluster 4 contains 2 ligand types

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Ligand		Description
		1. Ligand: NAG × 2 n-acetylglucosamine 2-Acetamido-2-Deoxy-Beta-D-Glucopyranose PDB codes: 3wpf(A), 3wph(A).
		2. Ligand: NAG-NAG × 1 NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose. PDB code: 5zln(A).

Cluster 5 contains 2 ligand types

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Ligand		Description
		1. Ligand: NAG × 2 n-acetylglucosamine 2-Acetamido-2-Deoxy-Beta-D-Glucopyranose PDB codes: 4qdh(A),
		2. Ligand: NAG-NAG × 1 NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose. PDB code: 5zln(A).

Cluster 6 contains 1 ligand type

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Ligand		Description
		1. Ligand: NAG-NAG-BMA × 1 NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, BMA=Beta-D-Mannopyranose. PDB code: 5zln(A).