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Ligand clusters for UniProt code Q94AG2

Ligand clusters for Q94AG2: Somatic embryogenesis receptor kinase 1 from Arabidopsis thaliana

Top 6 (of 8) ligand clusters
Cluster 1.
4 ligand types
8 ligands
Cluster 2.
2 ligand types
4 ligands
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
1 ligand
Representative protein: 6fg8A  
JSmol
 

Structures

PDB   Schematic diagram
6fg8A    
5iyxC    
4z64C    
4lsxC    
4lscA    

 

 Cluster 1 contains 4 ligand types

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Ligand Description


 
1. Ligand: NAG × 5
n-acetylglucosamine
2-Acetamido-2-Deoxy-Beta-D-Glucopyranose
PDB codes: 4lsc(A), 4lsx(C), 4z64(C), 5iyx(C).


 
2. Ligand: NAG-NAG × 1
NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose.
PDB code: 6fg8(A).


 
3. Ligand: NAG-NAG-BMA × 1
NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, BMA=Beta-D-Mannopyranose.
PDB code: 6fg8(A).


 
4. Ligand: NAG-NAG-BMA-FUC × 1
NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, BMA=Beta-D-Mannopyranose, FUC=Alpha-L-Fucopyranose.
PDB code: 4lsc(A).

 

 Cluster 2 contains 2 ligand types

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Ligand Description


 
1. Ligand: NAG × 2
n-acetylglucosamine
2-Acetamido-2-Deoxy-Beta-D-Glucopyranose
PDB codes: 4lsc(A), 5iyx(C).


 
2. Ligand: NAG-NAG × 2
NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose.
PDB codes: 6fg8(A),

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: BLD × 1
Brassinolide
PDB code: 4lsx(C).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: NAG-NAG × 1
NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose.
PDB code: 5iyx(C).

 

 Cluster 5 contains 1 ligand type

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Ligand Description


 
1. Ligand: NAG-NAG × 1
NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose.
PDB code: 6fg8(A).

 

 Cluster 6 contains 1 ligand type

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Ligand Description


 
1. Ligand: 1PE × 1
Pentaethylene glycol
PDB code: 6fg8(A).

 

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