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Ligand clusters for UniProt code Q8U051

Ligand clusters for Q8U051: Signal recognition particle receptor FtsY from Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)

6 ligand clusters
Cluster 1.
4 ligand types
4 ligands
Cluster 2.
1 ligand type
1 ligand
Cluster 3.
3 ligand types
3 ligands
Cluster 4.
2 ligand types
2 ligands
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
1 ligand
Representative protein: 3dmdB  
JSmol
 

Structures

PDB   Schematic diagram
3dmdB    
3e70C    
3dm9B    

 

 Cluster 1 contains 4 ligand types

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Ligand Description

_Mg
 
1. Metal: _MG × 1
PDB code: 3e70(C).


 
2. Ligand: GDP × 1
Guanosine-5'-Diphosphate
PDB code: 3e70(C).


 
3. Ligand: PO4 × 1
Phosphate ion
PDB code: 3dm9(B).


 
4. Ligand: SO4 × 1
Sulfate ion
PDB code: 3dmd(B).

 

 Cluster 2 contains 1 ligand type

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Ligand Description


 
1. Ligand: GDP × 1
Guanosine-5'-Diphosphate
PDB code: 3e70(C).

 

 Cluster 3 contains 3 ligand types

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 3dmd(B).


 
2. Ligand: PO4 × 1
Phosphate ion
PDB code: 3dm9(B).


 
3. Ligand: SO4 × 1
Sulfate ion
PDB code: 3dmd(B).

 

 Cluster 4 contains 2 ligand types

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Ligand Description


 
1. Ligand: MPD × 1
(4s)-2-Methyl-2,4-Pentanediol
PDB code: 3dm9(B).


 
2. Ligand: SO4 × 1
Sulfate ion
PDB code: 3dmd(B).

 

 Cluster 5 contains 1 ligand type

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Ligand Description


 
1. Ligand: PO4 × 1
Phosphate ion
PDB code: 3dm9(B).

 

 Cluster 6 contains 1 ligand type

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Ligand Description


 
1. Ligand: PO4 × 1
Phosphate ion
PDB code: 3dm9(B).

 

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