Ligand clusters for UniProt code Q8TLY9

Ligand clusters for Q8TLY9: Uncharacterized protein from Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A)

		Top 6 (of 22) ligand clusters Cluster 1. 7 ligand types 21 ligands Cluster 2. 2 ligand types 2 ligands Cluster 3. 3 ligand types 6 ligands Cluster 4. 2 ligand types 4 ligands Cluster 5. 2 ligand types 2 ligands Cluster 6. 1 ligand type 3 ligands
Representative protein: 3zjiA

Structures

PDB		Schematic diagram
3zjiA
3zjjA
3zjmA
3zjnA
2veeA
		more ...

Cluster 1 contains 7 ligand types

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Ligand		Description
		1. Ligand: GOL × 1 glycerin Glycerol PDB code: 3zji(A).
		2. Ligand: HEM × 8 Protoporphyrin IX containing fe PDB codes: 2veb(A), 2vee(A), 3qzx(A), 3qzz(A), 3r0g(A), 3zjp(A), 3zjr(A), 3zom(A).
		3. Ligand: HEM-CYN × 7 HEM=Protoporphyrin IX containing fe, CYN=Cyanide ion. PDB codes: 3zjh(A), 3zji(A), 3zjj(A), 3zjl(A), 3zjm(A), 3zjn(A), 3zol(A).
		4. Ligand: HEM-AZI × 2 AZI=Azide ion, HEM=Protoporphyrin IX containing fe. PDB codes: 3zjo(A), 3zjs(A).
		5. Ligand: HEM-FMT × 1 HEM=Protoporphyrin IX containing fe, FMT=Formic acid. PDB code: 3zh0(A).
		6. Ligand: HEM-NCA × 1 HEM=Protoporphyrin IX containing fe, NCA=Nicotinamide. PDB code: 3zjq(A).
		7. Ligand: IMD × 1 Imidazole PDB code: 3zjp(A).

Cluster 2 contains 2 ligand types

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Ligand		Description
		1. Ligand: GOL × 1 glycerin Glycerol PDB code: 3zjm(A).
		2. Ligand: EPE × 1 4-(2-Hydroxyethyl)-1-Piperazine ethanesulfonic acid PDB code: 3r0g(A).

Cluster 3 contains 3 ligand types

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Ligand		Description
		1. Ligand: GOL × 1 glycerin Glycerol PDB code: 3zjp(A).
		2. Ligand: IPA × 1 isopropyl alcohol Isopropyl alcohol PDB code: 3zjj(A).
		3. Ligand: PO4 × 4 Phosphate ion PDB codes: 2veb(A), 3qzx(A), 3zjn(A), 3zjp(A).

Cluster 4 contains 2 ligand types

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Ligand		Description
		1. Ligand: GOL × 1 glycerin Glycerol PDB code: 3zji(A).
		2. Ligand: PO4 × 3 Phosphate ion PDB codes: 2veb(A), 3qzx(A), 3zjp(A).

Cluster 5 contains 2 ligand types

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Ligand		Description
		1. Ligand: GOL × 1 glycerin Glycerol PDB code: 3zjj(A).
		2. Ligand: IPA × 1 isopropyl alcohol Isopropyl alcohol PDB code: 3r0g(A).

Cluster 6 contains 1 ligand type

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Ligand		Description
		1. Ligand: GOL × 3 glycerin Glycerol PDB codes: 2veb(A), 3qzx(A), 3zjp(A).