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EBI
Databases
Structure Databases
PDBsum
Ligand clusters for UniProt code Q8TAF3
Ligand clusters for Q8TAF3: WD repeat-containing protein 48 from Homo sapiens
Top 6 (of 13) ligand clusters
Cluster 1.
3 ligand types
6 ligands
Cluster 2.
2 ligand types
4 ligands
Cluster 3.
2 ligand types
2 ligands
Cluster 4.
2 ligand types
3 ligands
Cluster 5.
1 ligand type
2 ligands
Cluster 6.
1 ligand type
2 ligands
Representative protein: 5cvlA
Structures
PDB
Schematic diagram
5cvl
A
5k1c
B
6jlq
B
5l8e
A
Cluster 1 contains 3 ligand types
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Ligand
Description
1. Ligand:
GOL × 4
glycerin
Glycerol
PDB codes:
5l8e
(A),
6jlq
(B).
2. Ligand:
UNK-UNK-UNK-UNK-UNK × 1
PDB code:
5l8e
(A).
_Au
3. Metal:
_AU × 1
PDB code:
5cvl
(A).
Cluster 2 contains 2 ligand types
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
5l8e
(A).
2. Ligand:
PO4 × 3
Phosphate ion
PDB codes:
5cvl
(A),
5k1c
(B),
6jlq
(B).
Cluster 3 contains 2 ligand types
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
6jlq
(B).
2. Ligand:
PO4 × 1
Phosphate ion
PDB code:
5cvl
(A).
Cluster 4 contains 2 ligand types
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
6jlq
(B).
_Au
2. Metal:
_AU × 2
PDB codes:
5cvl
(A),
Cluster 5 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 2
glycerin
Glycerol
PDB codes:
5l8e
(A),
Cluster 6 contains 1 ligand type
Selection shortcuts:
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Ligand
Description
1. Ligand:
GOL × 2
glycerin
Glycerol
PDB codes:
5l8e
(A),