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Ligand clusters for UniProt code Q8GMV7

Ligand clusters for Q8GMV7: Endo-1,4-beta-xylanase from Thermopolyspora flexuosa

Top 6 (of 9) ligand clusters
Cluster 1.
1 ligand type
1 ligand
Cluster 2.
1 ligand type
1 ligand
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
4 ligands
Cluster 6.
1 ligand type
3 ligands
Representative protein: 3b5lB  
JSmol
 

Structures

PDB   Schematic diagram
3b5lB    
3mf9A    
3mfaA    
3mf6A    
1m4wA    
 more ...

 

 Cluster 1 contains 1 ligand type

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Ligand Description


 
1. Ligand: NAG-NAG-BMA-MAN × 1
NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, BMA=Beta-D-Mannopyranose, MAN=Alpha-D-Mannopyranose.
PDB code: 1m4w(A).

 

 Cluster 2 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 1m4w(A).

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: SO4 × 1
Sulfate ion
PDB code: 3b5l(B).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: SO4 × 1
Sulfate ion
PDB code: 3b5l(B).

 

 Cluster 5 contains 1 ligand type

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Ligand Description


 
1. Ligand: SO4 × 4
Sulfate ion
PDB codes: 3mf6(A), 3mf9(A), 3mfa(A), 3mfc(A).

 

 Cluster 6 contains 1 ligand type

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Ligand Description


 
1. Ligand: SO4 × 3
Sulfate ion
PDB codes: 3mf6(A), 3mf9(A), 3mfa(A).

 

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