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EBI
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PDBsum
Ligand clusters for UniProt code Q6XZF7
Ligand clusters for Q6XZF7: Dynamin-binding protein from Homo sapiens
6 ligand clusters
Cluster 1.
3 ligand types
7 ligands
Cluster 2.
1 ligand type
1 ligand
Cluster 3.
1 ligand type
3 ligands
Cluster 4.
1 ligand type
4 ligands
Cluster 5.
1 ligand type
3 ligands
Cluster 6.
1 ligand type
3 ligands
Representative protein: 4cc4B
Structures
PDB
Schematic diagram
4cc4
B
4cc3
A
4cc7
C
4cc4
D
4cc7
A
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Cluster 1 contains 3 ligand types
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Ligand
Description
1. Ligand:
GOL × 4
glycerin
Glycerol
PDB codes:
4cc2
(A),
4cc4
(D),
4cc7
(A),
2. Ligand:
PE4 × 2
2-{2-[2-(2-{2-[2-(2-Ethoxy-Ethoxy)-Ethoxy]- Ethoxy}-Ethoxy)-Ethoxy]-Ethoxy}-Ethanol
PDB codes:
4cc3
(C),
4cc4
(D).
3. Ligand:
SO4 × 1
Sulfate ion
PDB code:
4cc4
(D).
Cluster 2 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
4cc2
(A).
Cluster 3 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 3
glycerin
Glycerol
PDB codes:
4cc2
(A),
4cc4
(B),
4cc7
(C).
Cluster 4 contains 1 ligand type
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Ligand
Description
_Cl
1. Metal:
_CL × 4
PDB codes:
4cc2
(A),
4cc3
(C),
4cc4
(D),
4cc7
(C).
Cluster 5 contains 1 ligand type
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Ligand
Description
_Cl
1. Metal:
_CL × 3
PDB codes:
4cc2
(A),
4cc7
(A),
Cluster 6 contains 1 ligand type
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Ligand
Description
_Cl
1. Metal:
_CL × 3
PDB codes:
4cc3
(A),
4cc7
(A),