Ligand clusters for UniProt code Q6V4S5

Ligand clusters for Q6V4S5: Protein sidekick-2 from Mus musculus

		Top 6 (of 17) ligand clusters Cluster 1. 3 ligand types 4 ligands Cluster 2. 4 ligand types 6 ligands Cluster 3. 4 ligand types 4 ligands Cluster 4. 1 ligand type 1 ligand Cluster 5. 1 ligand type 1 ligand Cluster 6. 1 ligand type 1 ligand
Representative protein: 5k70A

Structures

PDB		Schematic diagram
5k70A
5k6xA
5k6yA
5k6zA

Cluster 1 contains 3 ligand types

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Ligand		Description
		1. Ligand: NAG × 1 n-acetylglucosamine 2-Acetamido-2-Deoxy-Beta-D-Glucopyranose PDB code: 5k6z(A).
		2. Ligand: NAG-NAG-FUC × 2 NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, FUC=Alpha-L-Fucopyranose. PDB codes: 5k6y(A), 5k70(A).
		3. Ligand: NAG-FUC × 1 NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, FUC=Alpha-L-Fucopyranose. PDB code: 5k6x(A).

Cluster 2 contains 4 ligand types

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Ligand		Description
		1. Ligand: NAG × 3 n-acetylglucosamine 2-Acetamido-2-Deoxy-Beta-D-Glucopyranose PDB codes: 5k6x(A), 5k6z(A), 5k70(A).
		2. Ligand: MPD × 1 (4s)-2-Methyl-2,4-Pentanediol PDB code: 5k6z(A).
		3. Ligand: NAG-NAG × 1 NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose. PDB code: 5k6y(A).
		4. Ligand: SO4 × 1 Sulfate ion PDB code: 5k6x(A).

Cluster 3 contains 4 ligand types

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Ligand		Description
		1. Ligand: NAG × 1 n-acetylglucosamine 2-Acetamido-2-Deoxy-Beta-D-Glucopyranose PDB code: 5k6x(A).
		2. Ligand: MPD × 1 (4s)-2-Methyl-2,4-Pentanediol PDB code: 5k6z(A).
		3. Ligand: PO4 × 1 Phosphate ion PDB code: 5k70(A).
		4. Ligand: SO4 × 1 Sulfate ion PDB code: 5k6x(A).

Cluster 4 contains 1 ligand type

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Ligand		Description
		1. Ligand: GOL × 1 glycerin Glycerol PDB code: 5k6x(A).

Cluster 5 contains 1 ligand type

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Ligand		Description
		1. Ligand: SO4 × 1 Sulfate ion PDB code: 5k6x(A).

Cluster 6 contains 1 ligand type

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Ligand		Description
		1. Ligand: SO4 × 1 Sulfate ion PDB code: 5k6x(A).