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Ligand clusters for UniProt code Q65Z69

Ligand clusters for Q65Z69: Alkaline serine protease from Pseudoalteromonas sp. AS-11

6 ligand clusters
Cluster 1.
2 ligand types
3 ligands
Cluster 2.
1 ligand type
1 ligand
Cluster 3.
1 ligand type
2 ligands
Cluster 4.
3 ligand types
5 ligands
Cluster 5.
2 ligand types
4 ligands
Cluster 6.
1 ligand type
3 ligands
Representative protein: 1v6cA  
JSmol
 

Structures

PDB   Schematic diagram
1v6cA    
1wvmA    
1y9zA    

 

 Cluster 1 contains 2 ligand types

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Ligand Description


 
1. Ligand: PMS × 2
Phenylmethanesulfonic acid
PDB codes: 1v6c(A), 1y9z(A).


 
2. Ligand: PHE-CSI-LEU-PHA × 1
CSI=Amino-(2-Imino-Hexahydro-Pyrimidin-4-Yl)-Acetic acid, PHA=Phenylalaninal.
PDB code: 1wvm(A).

 

 Cluster 2 contains 1 ligand type

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Ligand Description


 
1. Ligand: TRS × 1
tromethamine
2-Amino-2-Hydroxymethyl-Propane-1,3-Diol
PDB code: 1y9z(A).

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: SO4 × 2
Sulfate ion
PDB codes: 1v6c(A), 1y9z(A).

 

 Cluster 4 contains 3 ligand types

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Ligand Description

_Mg
 
1. Metal: _MG × 2
PDB codes: 1wvm(A),

_Na
 
2. Metal: _NA × 2
PDB codes: 1y9z(A),

_Ca
 
3. Metal: _CA × 1
PDB code: 1v6c(A).

 

 Cluster 5 contains 2 ligand types

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Ligand Description

_Mg
 
1. Metal: _MG × 1
PDB code: 1wvm(A).

_Ca
 
2. Metal: _CA × 3
PDB codes: 1v6c(A), 1wvm(A), 1y9z(A).

 

 Cluster 6 contains 1 ligand type

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Ligand Description

_Ca
 
1. Metal: _CA × 3
PDB codes: 1v6c(A), 1wvm(A), 1y9z(A).

 

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