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EBI
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PDBsum
Ligand clusters for UniProt code Q65Z69
Ligand clusters for Q65Z69: Alkaline serine protease from Pseudoalteromonas sp. AS-11
6 ligand clusters
Cluster 1.
2 ligand types
3 ligands
Cluster 2.
1 ligand type
1 ligand
Cluster 3.
1 ligand type
2 ligands
Cluster 4.
3 ligand types
5 ligands
Cluster 5.
2 ligand types
4 ligands
Cluster 6.
1 ligand type
3 ligands
Representative protein: 1v6cA
Structures
PDB
Schematic diagram
1v6c
A
1wvm
A
1y9z
A
Cluster 1 contains 2 ligand types
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Ligand
Description
1. Ligand:
PMS × 2
Phenylmethanesulfonic acid
PDB codes:
1v6c
(A),
1y9z
(A).
2. Ligand:
PHE-CSI-LEU-PHA × 1
CSI
=Amino-(2-Imino-Hexahydro-Pyrimidin-4-Yl)-Acetic acid,
PHA
=Phenylalaninal.
PDB code:
1wvm
(A).
Cluster 2 contains 1 ligand type
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Ligand
Description
1. Ligand:
TRS × 1
tromethamine
2-Amino-2-Hydroxymethyl-Propane-1,3-Diol
PDB code:
1y9z
(A).
Cluster 3 contains 1 ligand type
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Ligand
Description
1. Ligand:
SO4 × 2
Sulfate ion
PDB codes:
1v6c
(A),
1y9z
(A).
Cluster 4 contains 3 ligand types
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Ligand
Description
_Mg
1. Metal:
_MG × 2
PDB codes:
1wvm
(A),
_Na
2. Metal:
_NA × 2
PDB codes:
1y9z
(A),
_Ca
3. Metal:
_CA × 1
PDB code:
1v6c
(A).
Cluster 5 contains 2 ligand types
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Ligand
Description
_Mg
1. Metal:
_MG × 1
PDB code:
1wvm
(A).
_Ca
2. Metal:
_CA × 3
PDB codes:
1v6c
(A),
1wvm
(A),
1y9z
(A).
Cluster 6 contains 1 ligand type
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Ligand
Description
_Ca
1. Metal:
_CA × 3
PDB codes:
1v6c
(A),
1wvm
(A),
1y9z
(A).