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Ligand clusters for UniProt code Q5XJA0

Ligand clusters for Q5XJA0: Tyrosyl-DNA phosphodiesterase 2 from Danio rerio

Top 6 (of 12) ligand clusters
Cluster 1.
1 ligand type
1 ligand
Cluster 2.
1 ligand type
1 ligand
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
2 ligand types
2 ligands
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
1 ligand
Representative protein: 4f1hA  
JSmol
 

Structures

PDB   Schematic diagram
4f1hA    
6ca4C    
4fpvA    
6ca4A    

 

 Cluster 1 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 4f1h(A).

 

 Cluster 2 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 4f1h(A).

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 4fpv(A).

 

 Cluster 4 contains 2 ligand types

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Ligand Description


 
1. Ligand: EDO × 1
1,2-Ethanediol
PDB code: 6ca4(A).

_Na
 
2. Metal: _NA × 1
PDB code: 4fpv(A).

 

 Cluster 5 contains 1 ligand type

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Ligand Description


 
1. Ligand: EDO × 1
1,2-Ethanediol
PDB code: 6ca4(A).

 

 Cluster 6 contains 1 ligand type

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Ligand Description


 
1. Ligand: EDO × 1
1,2-Ethanediol
PDB code: 6ca4(A).

 

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