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Ligand clusters for UniProt code Q5VWG9
Ligand clusters for Q5VWG9: Transcription initiation factor TFIID subunit 3 from Homo sapiens
5 ligand clusters
Cluster 1.
4 ligand types
6 ligands
Cluster 2.
1 ligand type
1 ligand
Cluster 3.
1 ligand type
3 ligands
Cluster 4.
1 ligand type
5 ligands
Cluster 5.
1 ligand type
5 ligands
Representative protein: 5wxgA
Structures
PDB
Schematic diagram
5wxg
A
5c13
A
5xmy
A
5wxh
A
5wxh
C
Cluster 1 contains 4 ligand types
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Ligand
Description
_Mg
1. Metal:
_MG × 1
PDB code:
5wxg
(A).
2. Ligand:
ALA-ARG-THR-M3L-GLN-THR-ALA × 3
M3L
=N-Trimethyllysine.
PDB codes:
5wxh
(A),
5xmy
(A).
3. Ligand:
ALA-ARG-THR-4WQ-GLN-THR × 1
4WQ
=(2s)-2-Amino-7,7-Dimethyloctanoic acid.
PDB code:
5c13
(A).
4. Ligand:
ALA-ARG-THR-ALY-GLN-THR-ALA × 1
ALY
=N(6)-Acetyllysine.
PDB code:
5wxg
(A).
Cluster 2 contains 1 ligand type
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Ligand
Description
1. Ligand:
ALA-ARG-THR-4WQ-GLN-THR × 1
4WQ
=(2s)-2-Amino-7,7-Dimethyloctanoic acid.
PDB code:
5c13
(A).
Cluster 3 contains 1 ligand type
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Ligand
Description
1. Ligand:
ALA-ARG-THR-M3L-GLN-THR-ALA × 3
M3L
=N-Trimethyllysine.
PDB codes:
5wxh
(A),
5xmy
(A).
Cluster 4 contains 1 ligand type
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Ligand
Description
_Zn
1. Metal:
_ZN × 5
PDB codes:
5c13
(A),
5wxg
(A),
5wxh
(A),
5xmy
(A).
Cluster 5 contains 1 ligand type
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Ligand
Description
_Zn
1. Metal:
_ZN × 5
PDB codes:
5c13
(A),
5wxg
(A),
5wxh
(A),
5xmy
(A).