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Ligand clusters for UniProt code Q59643
Ligand clusters for Q59643: Delta-aminolevulinic acid dehydratase from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Top 6 (of 22) ligand clusters
Cluster 1.
7 ligand types
15 ligands
Cluster 2.
2 ligand types
4 ligands
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
2 ligand types
2 ligands
Cluster 6.
2 ligand types
3 ligands
Representative protein: 2c13A
Structures
PDB
Schematic diagram
2c13
A
2c14
A
1w56
A
1w5o
A
2c19
A
more ...
Cluster 1 contains 7 ligand types
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Ligand
Description
_Zn
1. Metal:
_ZN × 7
PDB codes:
1w54
(A),
1w56
(A),
1w5m
(A),
1w5n
(A),
1w5o
(A),
1w5p
(A),
1w5q
(A).
_Mg
2. Metal:
_MG × 2
PDB codes:
2c18
(A),
2woq
(A).
3. Ligand:
LAF × 2
5-Fluorolevulinic acid
PDB codes:
1gzg
(A),
4. Ligand:
SO4 × 1
Sulfate ion
PDB code:
1b4k
(A).
5. Ligand:
AYC × 1
Alaremycin 2
PDB code:
2woq
(A).
6. Ligand:
SHF × 1
Laevulinic acid
PDB code:
1b4k
(A).
_Na
7. Metal:
_NA × 1
PDB code:
1gzg
(A).
Cluster 2 contains 2 ligand types
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Ligand
Description
1. Ligand:
PE5 × 2
3,6,9,12,15,18,21,24-Octaoxahexacosan-1-Ol
PDB codes:
2woq
(A),
2. Ligand:
PGE × 2
Triethylene glycol
PDB codes:
2c16
(A),
Cluster 3 contains 1 ligand type
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Ligand
Description
1. Ligand:
PE5 × 1
3,6,9,12,15,18,21,24-Octaoxahexacosan-1-Ol
PDB code:
2woq
(A).
Cluster 4 contains 1 ligand type
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Ligand
Description
1. Ligand:
PE5 × 1
3,6,9,12,15,18,21,24-Octaoxahexacosan-1-Ol
PDB code:
2woq
(A).
Cluster 5 contains 2 ligand types
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Ligand
Description
1. Ligand:
EPE × 1
4-(2-Hydroxyethyl)-1-Piperazine ethanesulfonic acid
PDB code:
2woq
(A).
_Cl
2. Metal:
_CL × 1
PDB code:
1w5m
(A).
Cluster 6 contains 2 ligand types
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Ligand
Description
_Cl
1. Metal:
_CL × 2
PDB codes:
1w5m
(A),
2c13
(A).
2. Ligand:
EPE × 1
4-(2-Hydroxyethyl)-1-Piperazine ethanesulfonic acid
PDB code:
2woq
(A).