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Ligand clusters for UniProt code Q56313

Ligand clusters for Q56313: Holliday junction ATP-dependent DNA helicase RuvB from Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099)

5 ligand clusters
Cluster 1.
2 ligand types
6 ligands
Cluster 2.
2 ligand types
4 ligands
Cluster 3.
1 ligand type
2 ligands
Cluster 4.
1 ligand type
3 ligands
Cluster 5.
1 ligand type
1 ligand
Representative protein: 1in5A  
JSmol
 

Structures

PDB   Schematic diagram
1in5A    
1in4A    
1in6A    
1in8A    
1j7kA    
 more ...

 

 Cluster 1 contains 2 ligand types

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Ligand Description


 
1. Ligand: ADP × 5
Adenosine-5'-Diphosphate
PDB codes: 1in4(A), 1in5(A), 1in6(A), 1in7(A), 1in8(A).


 
2. Ligand: ATP × 1
Adenosine-5'-Triphosphate
PDB code: 1j7k(A).

 

 Cluster 2 contains 2 ligand types

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Ligand Description


 
1. Ligand: ACT × 3
Acetate ion
PDB codes: 1in4(A), 1in6(A), 1j7k(A).


 
2. Ligand: HEZ × 1
Hexane-1,6-Diol
PDB code: 1in4(A).

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: HEZ × 2
Hexane-1,6-Diol
PDB codes: 1in4(A), 1j7k(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: ACT × 3
Acetate ion
PDB codes: 1in4(A), 1in7(A), 1j7k(A).

 

 Cluster 5 contains 1 ligand type

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Ligand Description


 
1. Ligand: ACT × 1
Acetate ion
PDB code: 1in7(A).

 

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