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Ligand clusters for UniProt code Q3KVL7

Ligand clusters for Q3KVL7: Codakine from Codakia orbicularis

6 ligand clusters
Cluster 1.
3 ligand types
3 ligands
Cluster 2.
1 ligand type
1 ligand
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
1 ligand
Representative protein: 2vuvA  
JSmol
 

Structures

PDB   Schematic diagram
2vuvA    
2vuzA    

 

 Cluster 1 contains 3 ligand types

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 2vuv(A).


 
2. Ligand: NAG-NAG-BMA-MAN-NAG-MAN-NAG × 1
NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, BMA=Beta-D-Mannopyranose, MAN=Alpha-D-Mannopyranose.
PDB code: 2vuz(A).

_Ca
 
3. Metal: _CA × 1
PDB code: 2vuv(A).

 

 Cluster 2 contains 1 ligand type

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Ligand Description


 
1. Ligand: CIT × 1
citric acid
Citric acid
PDB code: 2vuv(A).

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 2vuv(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 2vuz(A).

 

 Cluster 5 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 2vuz(A).

 

 Cluster 6 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 2vuz(A).

 

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