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Ligand clusters for UniProt code Q27709

Ligand clusters for Q27709: Obelin from Obelia longissima

6 ligand clusters
Cluster 1.
4 ligand types
14 ligands
Cluster 2.
2 ligand types
2 ligands
Cluster 3.
3 ligand types
6 ligands
Cluster 4.
1 ligand type
2 ligands
Cluster 5.
1 ligand type
3 ligands
Cluster 6.
1 ligand type
3 ligands
Representative protein: 1el4A  
JSmol
 

Structures

PDB   Schematic diagram
1el4A    
1s36A    
1jf2A    
1jf0A    
2f8pA    
 more ...

 

 Cluster 1 contains 4 ligand types

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Ligand Description


 
1. Ligand: GOL × 2
glycerin
Glycerol
PDB codes: 1qv0(A), 1qv1(A).


 
2. Ligand: CZH × 7
C2-Hydroperoxy-Coelenterazine
PDB codes: 1jf0(A), 1jf2(A), 1qv0(A), 1qv1(A), 1sl9(A), 4mrx(A), 4n1f(A).


 
3. Ligand: CEI × 4
N-[3-Benzyl-5-(4-Hydroxyphenyl)pyrazin-2-Yl]-2-(4- Hydroxyphenyl)acetamide
PDB codes: 1s36(A), 2f8p(A), 4mry(A), 4n1g(A).


 
4. Ligand: CTZ × 1
C2-Hydroxy-Coelenterazine
PDB code: 1el4(A).

 

 Cluster 2 contains 2 ligand types

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 1s36(A).

_Cl
 
2. Metal: _CL × 1
PDB code: 1el4(A).

 

 Cluster 3 contains 3 ligand types

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Ligand Description

_Ca
 
1. Metal: _CA × 4
PDB codes: 1qv1(A), 1sl7(A), 2f8p(A), 4n1g(A).

_Cl
 
2. Metal: _CL × 1
PDB code: 1s36(A).

_Na
 
3. Metal: _NA × 1
PDB code: 1s36(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description

__K
 
1. Metal: __K × 2
PDB codes: 1qv0(A), 1qv1(A).

 

 Cluster 5 contains 1 ligand type

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Ligand Description

_Ca
 
1. Metal: _CA × 3
PDB codes: 1sl7(A), 2f8p(A), 4n1g(A).

 

 Cluster 6 contains 1 ligand type

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Ligand Description

_Ca
 
1. Metal: _CA × 3
PDB codes: 1sl7(A), 2f8p(A), 4n1g(A).

 

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