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EBI
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PDBsum
Ligand clusters for UniProt code Q27709
Ligand clusters for Q27709: Obelin from Obelia longissima
6 ligand clusters
Cluster 1.
4 ligand types
14 ligands
Cluster 2.
2 ligand types
2 ligands
Cluster 3.
3 ligand types
6 ligands
Cluster 4.
1 ligand type
2 ligands
Cluster 5.
1 ligand type
3 ligands
Cluster 6.
1 ligand type
3 ligands
Representative protein: 1el4A
Structures
PDB
Schematic diagram
1el4
A
1s36
A
1jf2
A
1jf0
A
2f8p
A
more ...
Cluster 1 contains 4 ligand types
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Ligand
Description
1. Ligand:
GOL × 2
glycerin
Glycerol
PDB codes:
1qv0
(A),
1qv1
(A).
2. Ligand:
CZH × 7
C2-Hydroperoxy-Coelenterazine
PDB codes:
1jf0
(A),
1jf2
(A),
1qv0
(A),
1qv1
(A),
1sl9
(A),
4mrx
(A),
4n1f
(A).
3. Ligand:
CEI × 4
N-[3-Benzyl-5-(4-Hydroxyphenyl)pyrazin-2-Yl]-2-(4- Hydroxyphenyl)acetamide
PDB codes:
1s36
(A),
2f8p
(A),
4mry
(A),
4n1g
(A).
4. Ligand:
CTZ × 1
C2-Hydroxy-Coelenterazine
PDB code:
1el4
(A).
Cluster 2 contains 2 ligand types
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
1s36
(A).
_Cl
2. Metal:
_CL × 1
PDB code:
1el4
(A).
Cluster 3 contains 3 ligand types
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Ligand
Description
_Ca
1. Metal:
_CA × 4
PDB codes:
1qv1
(A),
1sl7
(A),
2f8p
(A),
4n1g
(A).
_Cl
2. Metal:
_CL × 1
PDB code:
1s36
(A).
_Na
3. Metal:
_NA × 1
PDB code:
1s36
(A).
Cluster 4 contains 1 ligand type
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Ligand
Description
__K
1. Metal:
__K × 2
PDB codes:
1qv0
(A),
1qv1
(A).
Cluster 5 contains 1 ligand type
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Ligand
Description
_Ca
1. Metal:
_CA × 3
PDB codes:
1sl7
(A),
2f8p
(A),
4n1g
(A).
Cluster 6 contains 1 ligand type
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Ligand
Description
_Ca
1. Metal:
_CA × 3
PDB codes:
1sl7
(A),
2f8p
(A),
4n1g
(A).