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EBI
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PDBsum
Ligand clusters for UniProt code Q13882
Ligand clusters for Q13882: Protein-tyrosine kinase 6 from Homo sapiens
Top 6 (of 13) ligand clusters
Cluster 1.
4 ligand types
4 ligands
Cluster 2.
1 ligand type
3 ligands
Cluster 3.
1 ligand type
2 ligands
Cluster 4.
1 ligand type
3 ligands
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
2 ligand types
2 ligands
Representative protein: 5d7vA
Structures
PDB
Schematic diagram
5d7v
A
5da3
A
5h2u
A
6cz4
A
6cz3
A
Cluster 1 contains 4 ligand types
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Ligand
Description
1. Ligand:
1N1 × 1
dasatinib
N-(2-Chloro-6-Methylphenyl)-2-({6-[4-(2-Hydroxyethyl) piperazin-1-Yl]-2-Methylpyrimidin-4-
Yl}amino)-1,3- Thiazole-5-Carboxamide
PDB code:
5h2u
(A).
2. Ligand:
58V × 1
(2-Chloro-4-{[6-Cyclopropyl-3-(1h-Pyrazol-4-Yl) imidazo[1,2-A]pyrazin-8-Yl]amino}phenyl)(morpholin-
4- Yl)methanone
PDB code:
5da3
(A).
3. Ligand:
FKY × 1
2-{[(3r,4s)-3-Fluoro-1-{[4-(Trifluoromethoxy) phenyl]acetyl}piperidin-4-Yl]oxy}-5-(1-Methyl-1h-
Imidazol-4-Yl)pyridine-3-Carboxamide
PDB code:
6cz4
(A).
4. Ligand:
FLJ × 1
(3-Fluoro-4-{[6-Methyl-3-(1h-Pyrazol-4-Yl)imidazo[1,2- A]pyrazin-8-Yl]amino}phenyl)(morpholin-4-
Yl)methanone
PDB code:
6cz3
(A).
Cluster 2 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 3
glycerin
Glycerol
PDB codes:
5d7v
(A),
5da3
(A),
5h2u
(A).
Cluster 3 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 2
glycerin
Glycerol
PDB codes:
5d7v
(A),
5h2u
(A).
Cluster 4 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 3
glycerin
Glycerol
PDB codes:
5d7v
(A),
5da3
(A),
5h2u
(A).
Cluster 5 contains 1 ligand type
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Ligand
Description
1. Ligand:
PO4 × 1
Phosphate ion
PDB code:
5d7v
(A).
Cluster 6 contains 2 ligand types
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Ligand
Description
__K
1. Metal:
__K × 1
PDB code:
6cz3
(A).
2. Ligand:
ACT × 1
Acetate ion
PDB code:
6cz3
(A).