Ligand clusters for UniProt code Q12830

Ligand clusters for Q12830: Nucleosome-remodeling factor subunit BPTF from Homo sapiens

		Top 6 (of 12) ligand clusters Cluster 1. 19 ligand types 19 ligands Cluster 2. 3 ligand types 4 ligands Cluster 3. 2 ligand types 9 ligands Cluster 4. 1 ligand type 1 ligand Cluster 5. 1 ligand type 1 ligand Cluster 6. 1 ligand type 9 ligands
Representative protein: 2f6jA

Structures

PDB		Schematic diagram
2f6jA
2fsaA
3qzvA
6azeA
2ri7A
		more ...

Cluster 1 contains 19 ligand types

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Ligand		Description
		1. Ligand: DMS × 1 dimethyl sulfoxide Dimethyl sulfoxide PDB code: 5r4o(A).
		2. Ligand: IPA × 1 isopropyl alcohol Isopropyl alcohol PDB code: 2ri7(A).
		3. Ligand: 7PE × 1 2-(2-(2-(2-(2-(2-Ethoxyethoxy)ethoxy)ethoxy)ethoxy) ethoxy)ethanol PDB code: 3uv2(A).
		4. Ligand: 9ST × 1 4-Bromo-2-Methyl-5-[[(3~{r},5~{r})-1-Methyl-5-Phenyl- Piperidin-3-Yl]amino]pyridazin-3-One PDB code: 7k6r(A).
		5. Ligand: GLY-ALA-ALY-ARG-HIS-ARG × 1 ALY=N(6)-Acetyllysine. PDB code: 3qzt(A).
		6. Ligand: GLY-ALA-ALY-ARG-HIS-ARG-LYS-VAL × 1 ALY=N(6)-Acetyllysine. PDB code: 3qzs(A).
		7. Ligand: GLY-KCR-GLY × 1 KCR=N-6-Crotonyl-L-Lysine. PDB code: 5h6y(A).
		8. Ligand: GLY-LYS-GLY-LEU-GLY-ALY × 1 ALY=N(6)-Acetyllysine. PDB code: 3qzv(A).
		9. Ligand: HWH × 1 ~{N}-[2-(5-Fluoranyl-1~{h}-Indol-3-Yl)ethyl]ethanamide PDB code: 5r4h(A).
		10. Ligand: K0V × 1 Methyl 1-(Tert-Butylcarbamoyl)piperidine-4-Carboxylate PDB code: 5r4k(A).
		11. Ligand: K3D × 1 4-Acetyl-N-Ethylpiperazine-1-Carboxamide PDB code: 5r4n(A).
		12. Ligand: M25 × 1 N-{2-[4-(Aminosulfonyl)phenyl]ethyl}acetamide PDB code: 5r4m(A).
		13. Ligand: RU4 × 1 4-(1,2,3-Thiadiazol-4-Yl)phenyl ethylcarbamate PDB code: 5r4g(A).
		14. Ligand: RUV × 1 4-(Acetylamino)-N-(4h-1,2,4-Triazol-4-Yl)benzamide PDB code: 5r4i(A).
		15. Ligand: RUY × 1 4-(Piperidin-1-Yl)-1,2,5-Oxadiazol-3-Amine PDB code: 5r4j(A).
		16. Ligand: RV4 × 1 N-{4-[(Morpholin-4-Yl)methyl]phenyl}acetamide PDB code: 5r4l(A).
		17. Ligand: VYM × 1 (7-Amino-3,4-Dihydroquinolin-1(2h)-Yl)(cyclopropyl) methanone PDB code: 7k6s(A).
		18. Ligand: WCS × 1 6-{4-[3-(Dimethylamino)propoxy]phenyl}-2- (Methylsulfonyl)-N-[3-(1h-Pyrazol-1- Yl) propyl]pyrimidin-4-Amine PDB code: 7kdz(A).
		19. Ligand: WCV × 1 Cyclopropyl[7-({2-[(Prop-2-Yn-1-Yl)amino]pyrimidin-4- Yl}amino)-3,4-Dihydroquinolin-1(2h)- Yl]methanone PDB code: 7kdw(A).

Cluster 2 contains 3 ligand types

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Ligand		Description
		1. Ligand: ALA-ARG-THR-MLY-GLN-THR × 2 MLY=N-Dimethyl-Lysine. PDB codes: 2fsa(A), 2ri7(A).
		2. Ligand: ALA-ARG-THR-M3L-GLN-THR × 1 M3L=N-Trimethyllysine. PDB code: 2f6j(A).
		3. Ligand: ALA-ARG-THR-ML3-GLN-THR × 1 ML3=2-{[(2r)-2-Amino-2-Carboxyethyl]sulfanyl}-N,N,N- Trimethylethanaminium. PDB code: 6aze(A).

Cluster 3 contains 2 ligand types

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Ligand		Description
		1. Ligand: TRS × 8 tromethamine 2-Amino-2-Hydroxymethyl-Propane-1,3-Diol PDB codes: 5r4h(A), 5r4i(A), 5r4j(A), 5r4k(A), 5r4l(A), 5r4m(A), 5r4n(A), 5r4o(A).
		2. Ligand: GOL × 1 glycerin Glycerol PDB code: 7k6s(A).

Cluster 4 contains 1 ligand type

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Ligand		Description
		1. Ligand: GOL × 1 glycerin Glycerol PDB code: 2ri7(A).

Cluster 5 contains 1 ligand type

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Ligand		Description
		1. Ligand: GOL × 1 glycerin Glycerol PDB code: 3qzt(A).

Cluster 6 contains 1 ligand type

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Ligand		Description
		1. Ligand: DMS × 9 dimethyl sulfoxide Dimethyl sulfoxide PDB codes: 5r4g(A), 5r4h(A), 5r4i(A), 5r4j(A), 5r4k(A), 5r4l(A), 5r4m(A), 5r4n(A), 5r4o(A).