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Ligand clusters for UniProt code Q08751

Ligand clusters for Q08751: Neopullulanase 2 from Thermoactinomyces vulgaris

3 ligand clusters
Cluster 1.
7 ligand types
9 ligands
Cluster 2.
5 ligand types
9 ligands
Cluster 3.
1 ligand type
7 ligands
Representative protein: 1g1yA  
JSmol
 

Structures

PDB   Schematic diagram
1g1yA    
1jibA    
1jl8A    
2d2oA    
1vb9A    
 more ...

 

 Cluster 1 contains 7 ligand types

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Ligand Description


 
1. Ligand: GLC-GLC-GLC-GLC-GLC-GLC × 2
GLC=Alpha-D-Glucopyranose.
PDB codes: 1vb9(A), 2d2o(A).


 
2. Ligand: GLC-GLC-GLC-GLC-GLC-GLC-GLC × 2
GLC=Alpha-D-Glucopyranose.
PDB codes: 1g1y(A), 1jl8(A).


 
3. Ligand: ARE × 1
Acarbose derived pentasaccharide
PDB code: 3a6o(A).


 
4. Ligand: GLC-GLC-GLC-GLC × 1
GLC=Alpha-D-Glucopyranose.
PDB code: 1jib(A).


 
5. Ligand: GLC-GLC-GLC-GLC-GLC-BGC × 1
GLC=Alpha-D-Glucopyranose, BGC=Beta-D-Glucopyranose.
PDB code: 1vfm(A).


 
6. Ligand: GLC-GLC-GLC-GLC-GLC-BGC-GLC × 1
GLC=Alpha-D-Glucopyranose, BGC=Beta-D-Glucopyranose.
PDB code: 1vfo(A).


 
7. Ligand: GLC-GLC-GLC-GLC-GLC-GLC-GLC-GLC × 1
GLC=Alpha-D-Glucopyranose.
PDB code: 1vfu(A).

 

 Cluster 2 contains 5 ligand types

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Ligand Description


 
1. Ligand: GLC-GLC-GLC-GLC-GLC-GLC × 3
GLC=Alpha-D-Glucopyranose.
PDB codes: 1vb9(A), 1vfm(A), 2d2o(A).


 
2. Ligand: GLC-GLC-GLC-GLC-GLC-GLC-GLC × 3
GLC=Alpha-D-Glucopyranose.
PDB codes: 1g1y(A), 1jl8(A), 1vfo(A).


 
3. Ligand: ARE × 1
Acarbose derived pentasaccharide
PDB code: 3a6o(A).


 
4. Ligand: GLC-GLC-GLC-GLC × 1
GLC=Alpha-D-Glucopyranose.
PDB code: 1jib(A).


 
5. Ligand: GLC-GLC-GLC-GLC-GLC-GLC-GLC-GLC × 1
GLC=Alpha-D-Glucopyranose.
PDB code: 1vfu(A).

 

 Cluster 3 contains 1 ligand type

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Ligand Description

_Ca
 
1. Metal: _CA × 7
PDB codes: 1jf5(A), 1jf6(A), 1ji2(A), 1wzk(A), 1wzl(A), 1wzm(A), 3a6o(A).

 

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