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EBI
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PDBsum
Ligand clusters for UniProt code Q07008
Ligand clusters for Q07008: Neurogenic locus notch homolog protein 1 from Rattus norvegicus
Top 6 (of 11) ligand clusters
Cluster 1.
2 ligand types
3 ligands
Cluster 2.
1 ligand type
2 ligands
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
3 ligands
Cluster 6.
1 ligand type
2 ligands
Representative protein: 5uk5A
Structures
PDB
Schematic diagram
5uk5
A
4xlw
A
4xl1
A
Cluster 1 contains 2 ligand types
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Ligand
Description
1. Ligand:
BGC × 2
Beta-D-Glucopyranose
PDB codes:
4xl1
(A),
4xlw
(A).
2. Ligand:
BGC-XYS × 1
BGC
=Beta-D-Glucopyranose,
XYS
=Alpha-D-Xylopyranose.
PDB code:
5uk5
(A).
Cluster 2 contains 1 ligand type
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Ligand
Description
1. Ligand:
NAG × 2
n-acetylglucosamine
2-Acetamido-2-Deoxy-Beta-D-Glucopyranose
PDB codes:
4xl1
(A),
4xlw
(A).
Cluster 3 contains 1 ligand type
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Ligand
Description
1. Ligand:
NAG × 1
n-acetylglucosamine
2-Acetamido-2-Deoxy-Beta-D-Glucopyranose
PDB code:
4xl1
(A).
Cluster 4 contains 1 ligand type
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Ligand
Description
1. Ligand:
NAG × 1
n-acetylglucosamine
2-Acetamido-2-Deoxy-Beta-D-Glucopyranose
PDB code:
5uk5
(A).
Cluster 5 contains 1 ligand type
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Ligand
Description
1. Ligand:
BGC × 3
Beta-D-Glucopyranose
PDB codes:
4xl1
(A),
4xlw
(A),
5uk5
(A).
Cluster 6 contains 1 ligand type
Selection shortcuts:
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Ligand
Description
1. Ligand:
BGC × 2
Beta-D-Glucopyranose
PDB codes:
4xl1
(A),
4xlw
(A).