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EBI
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Structure Databases
PDBsum
Ligand clusters for UniProt code Q05JF3
Ligand clusters for Q05JF3: Calsequestrin OS=Bos taurus GN=casq1 PE=2 SV=1
Top 6 (of 20) ligand clusters
Cluster 1.
3 ligand types
4 ligands
Cluster 2.
2 ligand types
2 ligands
Cluster 3.
1 ligand type
2 ligands
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
2 ligands
Cluster 6.
1 ligand type
1 ligand
Representative protein: 5kn2A
Structures
PDB
Schematic diagram
5kn2
A
5kn1
A
5kn0
A
5kn3
A
Cluster 1 contains 3 ligand types
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Ligand
Description
1. Ligand:
NAG × 1
n-acetylglucosamine
2-Acetamido-2-Deoxy-Beta-D-Glucopyranose
PDB code:
5kn0
(A).
2. Ligand:
MPD × 2
(4s)-2-Methyl-2,4-Pentanediol
PDB codes:
5kn0
(A),
5kn3
(A).
3. Ligand:
NAG-NAG × 1
NAG
=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose.
PDB code:
5kn2
(A).
Cluster 2 contains 2 ligand types
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Ligand
Description
1. Ligand:
MPD × 1
(4s)-2-Methyl-2,4-Pentanediol
PDB code:
5kn0
(A).
2. Ligand:
MRD × 1
(4r)-2-Methylpentane-2,4-Diol
PDB code:
5kn3
(A).
Cluster 3 contains 1 ligand type
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Ligand
Description
1. Ligand:
MPD × 2
(4s)-2-Methyl-2,4-Pentanediol
PDB codes:
5kn0
(A),
5kn3
(A).
Cluster 4 contains 1 ligand type
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Ligand
Description
1. Ligand:
MPD × 1
(4s)-2-Methyl-2,4-Pentanediol
PDB code:
5kn0
(A).
Cluster 5 contains 1 ligand type
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Ligand
Description
1. Ligand:
MPD × 2
(4s)-2-Methyl-2,4-Pentanediol
PDB codes:
5kn0
(A),
5kn1
(A).
Cluster 6 contains 1 ligand type
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Ligand
Description
1. Ligand:
MPD × 1
(4s)-2-Methyl-2,4-Pentanediol
PDB code:
5kn1
(A).