Ligand clusters for UniProt code Q04049

Ligand clusters for Q04049: DNA polymerase eta from Saccharomyces cerevisiae (strain ATCC 204508 / S288c)

		Top 6 (of 8) ligand clusters Cluster 1. 4 ligand types 26 ligands Cluster 2. 1 ligand type 4 ligands Cluster 3. 1 ligand type 4 ligands Cluster 4. 1 ligand type 2 ligands Cluster 5. 1 ligand type 1 ligand Cluster 6. 1 ligand type 3 ligands
Representative protein: 3ohaA

Structures

PDB		Schematic diagram
3ohaA
3ohbA
3mfiA
2xgqA
2xgpA
		more ...

Cluster 1 contains 4 ligand types

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Ligand		Description
_Mg		1. Metal: _MG × 9 PDB codes: 3mfh(A), 3mfi(A), 3oha(A), 3ohb(A), 5vtp(A).
_Ca		2. Metal: _CA × 10 PDB codes: 2r8j(A), 2r8k(A), 2wtf(A), 2xgp(A), 2xgq(A),
		3. Ligand: DTP × 4 2'-Deoxyadenosine 5'-Triphosphate PDB codes: 2r8k(A), 2wtf(A), 3mfh(A), 3mfi(A).
		4. Ligand: DCP × 3 2'-Deoxycytidine-5'-Triphosphate PDB codes: 2r8j(A), 3oha(A), 3ohb(A).

Cluster 2 contains 1 ligand type

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Ligand		Description
		1. Ligand: SO4 × 4 Sulfate ion PDB codes: 3mfh(A), 3mfi(A), 3oha(A), 3ohb(A).

Cluster 3 contains 1 ligand type

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Ligand		Description
		1. Ligand: SO4 × 4 Sulfate ion PDB codes: 3mfh(A), 3mfi(A), 3oha(A), 3ohb(A).

Cluster 4 contains 1 ligand type

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Ligand		Description
		1. Ligand: SO4 × 2 Sulfate ion PDB codes: 3oha(A), 3ohb(A).

Cluster 5 contains 1 ligand type

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Ligand		Description
_Ca		1. Metal: _CA × 1 PDB code: 2wtf(A).

Cluster 6 contains 1 ligand type

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Ligand		Description
_Ca		1. Metal: _CA × 3 PDB codes: 2wtf(A), 2xgp(A), 2xgq(A).