Ligand clusters for UniProt code P83749

Ligand clusters for P83749: Signal recognition particle receptor FtsY from Thermus aquaticus

		Top 6 (of 22) ligand clusters Cluster 1. 7 ligand types 33 ligands Cluster 2. 2 ligand types 4 ligands Cluster 3. 2 ligand types 7 ligands Cluster 4. 2 ligand types 5 ligands Cluster 5. 1 ligand type 1 ligand Cluster 6. 1 ligand type 1 ligand
Representative protein: 2q9aA

Structures

PDB		Schematic diagram
2q9aA
2q9cA
2q9bB
2cnwD
2cnwF
		more ...

Cluster 1 contains 7 ligand types

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Ligand		Description
_Mg		1. Metal: _MG × 5 PDB codes: 1okk(D), 1rj9(A), 2cnw(D), 2j7p(D).
		2. Ligand: SO4 × 11 Sulfate ion PDB codes: 2iyl(D), 2q9a(A), 2q9b(A), 2q9c(A),
		3. Ligand: GDP × 5 Guanosine-5'-Diphosphate PDB codes: 2cnw(D), 2iyl(D).
		4. Ligand: GCP × 4 Phosphomethylphosphonic acid guanylate ester PDB codes: 1okk(D), 1rj9(A),
		5. Ligand: GNP × 4 Phosphoaminophosphonic acid-Guanylate ester PDB codes: 2j7p(D), 2q9b(A), 2q9c(A).
		6. Ligand: 5GP × 2 Guanosine-5'-Monophosphate PDB codes: 2cnw(D),
		7. Ligand: ALF × 2 Tetrafluoroaluminate ion PDB codes: 2cnw(D),

Cluster 2 contains 2 ligand types

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Ligand		Description
		1. Ligand: SO4 × 3 Sulfate ion PDB codes: 2iyl(D), 2q9b(A), 2q9c(A).
		2. Ligand: EDO × 1 1,2-Ethanediol PDB code: 2q9b(B).

Cluster 3 contains 2 ligand types

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Ligand		Description
		1. Ligand: SO4 × 5 Sulfate ion PDB codes: 2q9a(A), 2q9b(A), 2q9c(A),
		2. Ligand: EDO × 2 1,2-Ethanediol PDB codes: 2q9a(A), 2q9b(B).

Cluster 4 contains 2 ligand types

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Ligand		Description
		1. Ligand: SO4 × 3 Sulfate ion PDB codes: 2q9b(A), 2q9c(A).
		2. Ligand: EDO × 2 1,2-Ethanediol PDB codes: 2q9a(A), 2q9b(A).

Cluster 5 contains 1 ligand type

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Ligand		Description
		1. Ligand: SO4 × 1 Sulfate ion PDB code: 1okk(D).

Cluster 6 contains 1 ligand type

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Ligand		Description
		1. Ligand: SO4 × 1 Sulfate ion PDB code: 2q9a(A).