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Ligand clusters for UniProt code P71447
Ligand clusters for P71447: Beta-phosphoglucomutase from Lactococcus lactis subsp. lactis (strain IL1403)
Top 6 (of 25) ligand clusters
Cluster 1.
26 ligand types
69 ligands
Cluster 2.
2 ligand types
2 ligands
Cluster 3.
2 ligand types
2 ligands
Cluster 4.
2 ligand types
12 ligands
Cluster 5.
2 ligand types
2 ligands
Cluster 6.
2 ligand types
12 ligands
Representative protein: 5olwA
Structures
PDB
Schematic diagram
5olw
A
6h90
A
5ojz
A
6h8v
A
6h8u
A
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Cluster 1 contains 26 ligand types (of which only 20 are listed. Click
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Ligand
Description
1. Ligand:
GL1 × 3
1-O-Phosphono-Alpha-D-Galactopyranose
PDB codes:
1z4n
(A),
1z4o
(A).
_Mg
2. Metal:
_MG × 8
PDB codes:
1lvh
(A),
1zol
(A),
2wfa
(A),
2whe
(A),
3fm9
(A),
5ojz
(A),
6ydk
(A),
6ydl
(A).
3. Ligand:
CIT × 1
citric acid
Citric acid
PDB code:
6ydm
(A).
4. Ligand:
TRS × 1
tromethamine
2-Amino-2-Hydroxymethyl-Propane-1,3-Diol
PDB code:
6h94
(A).
5. Ligand:
G16 × 2
1,6-Di-O-Phosphono-Alpha-D-Glucopyranose
PDB codes:
1o03
(A),
1o08
(A).
6. Ligand:
BG6 × 9
6-O-Phosphono-Beta-D-Glucopyranose
PDB codes:
2wf5
(A),
2wf6
(A),
2wf8
(A),
2wf9
(A),
3zi4
(A),
5ok2
(A),
6hdk
(A),
6hdl
(A),
6hdm
(A).
7. Ligand:
ALF × 7
Tetrafluoroaluminate ion
PDB codes:
2wf6
(A),
2wf7
(A),
5o6r
(A),
5ok2
(A),
6h8w
(A),
6h8y
(A),
6hdk
(A).
8. Ligand:
MGF × 6
Trifluoromagnesate
PDB codes:
2wf5
(A),
5oly
(A),
6h8x
(A),
6h8z
(A),
6hdl
(A),
6hdm
(A).
9. Ligand:
ACT × 5
Acetate ion
PDB codes:
6h8x
(A),
6h93
(A),
6hdh
(A),
6ydm
(A).
10. Ligand:
BEF × 5
Beryllium trifluoride ion
PDB codes:
2wf8
(A),
2wf9
(A),
2wfa
(A),
5ojz
(A),
6h90
(A).
11. Ligand:
B16 × 3
1,6-Di-O-Phosphono-Beta-D-Glucopyranose
PDB codes:
5o6p
(A),
5ok0
(A),
5ok1
(A).
12. Ligand:
EDO × 2
1,2-Ethanediol
PDB codes:
5ok2
(A),
6ydj
(A).
13. Ligand:
G6P × 2
6-O-Phosphono-Alpha-D-Glucopyranose
PDB codes:
2wf9
(A),
5oly
(A).
14. Ligand:
PO4 × 2
Phosphate ion
PDB codes:
6h93
(A),
6h94
(A).
15. Ligand:
XGP × 2
1-O-Phosphono-Beta-D-Glucopyranose
PDB codes:
5o6r
(A),
6hdg
(A).
16. Ligand:
ALF-BG6 × 1
ALF
=Tetrafluoroaluminate ion,
BG6
=6-O-Phosphono-Beta-D-Glucopyranose.
PDB code:
6hdj
(A).
17. Ligand:
BG6-MGF × 1
BG6
=6-O-Phosphono-Beta-D-Glucopyranose,
MGF
=Trifluoromagnesate.
PDB code:
6ydj
(A).
18. Ligand:
G1P × 1
1-O-Phosphono-Alpha-D-Glucopyranose
PDB code:
2wf8
(A).
19. Ligand:
G7P × 1
6,7-Dideoxy-7-Phosphono-Beta-D-Gluco-Heptopyranose
PDB code:
2wf7
(A).
20. Ligand:
GRX-ALF × 1
GRX
=(1r)-1,5-Anhydro-1-[(S)-Fluoro(phosphono)methyl]-D- Glucitol,
ALF
=Tetrafluoroaluminate ion.
PDB code:
4c4t
(A).
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Cluster 2 contains 2 ligand types
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Ligand
Description
1. Ligand:
EDO × 1
1,2-Ethanediol
PDB code:
6h94
(A).
2. Ligand:
PEG × 1
Di(hydroxyethyl)ether
PDB code:
2wf8
(A).
Cluster 3 contains 2 ligand types
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Ligand
Description
1. Ligand:
EDO × 1
1,2-Ethanediol
PDB code:
5ok2
(A).
2. Ligand:
PEG × 1
Di(hydroxyethyl)ether
PDB code:
2wf8
(A).
Cluster 4 contains 2 ligand types
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Ligand
Description
1. Ligand:
EDO × 11
1,2-Ethanediol
PDB codes:
5ojz
(A),
5ok2
(A),
6h8x
(A),
6h90
(A),
6h93
(A),
6hdf
(A),
6hdh
(A),
6hdj
(A),
6hdk
(A),
6hdl
(A),
6hdm
(A).
2. Ligand:
PDO × 1
1,3-Propandiol
PDB code:
6ydj
(A).
Cluster 5 contains 2 ligand types
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Ligand
Description
1. Ligand:
EDO × 1
1,2-Ethanediol
PDB code:
5ojz
(A).
2. Ligand:
PDO × 1
1,3-Propandiol
PDB code:
6h8v
(A).
Cluster 6 contains 2 ligand types
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Ligand
Description
1. Ligand:
EDO × 11
1,2-Ethanediol
PDB codes:
5ojz
(A),
5ok2
(A),
6h8u
(A),
6h8x
(A),
6h90
(A),
6hdf
(A),
6hdg
(A),
6hdh
(A),
6hdj
(A),
6hdk
(A).
2. Ligand:
PDO × 1
1,3-Propandiol
PDB code:
6hdm
(A).