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Ligand clusters for UniProt code P71447

Ligand clusters for P71447: Beta-phosphoglucomutase from Lactococcus lactis subsp. lactis (strain IL1403)

Top 6 (of 25) ligand clusters
Cluster 1.
26 ligand types
69 ligands
Cluster 2.
2 ligand types
2 ligands
Cluster 3.
2 ligand types
2 ligands
Cluster 4.
2 ligand types
12 ligands
Cluster 5.
2 ligand types
2 ligands
Cluster 6.
2 ligand types
12 ligands
Representative protein: 5olwA  
JSmol
 

Structures

PDB   Schematic diagram
5olwA    
6h90A    
5ojzA    
6h8vA    
6h8uA    
 more ...

 

 Cluster 1 contains 26 ligand types (of which only 20 are listed. Click for all)

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Ligand Description


 
1. Ligand: GL1 × 3
1-O-Phosphono-Alpha-D-Galactopyranose
PDB codes: 1z4n(A), 1z4o(A).

_Mg
 
2. Metal: _MG × 8
PDB codes: 1lvh(A), 1zol(A), 2wfa(A), 2whe(A), 3fm9(A), 5ojz(A), 6ydk(A), 6ydl(A).


 
3. Ligand: CIT × 1
citric acid
Citric acid
PDB code: 6ydm(A).


 
4. Ligand: TRS × 1
tromethamine
2-Amino-2-Hydroxymethyl-Propane-1,3-Diol
PDB code: 6h94(A).


 
5. Ligand: G16 × 2
1,6-Di-O-Phosphono-Alpha-D-Glucopyranose
PDB codes: 1o03(A), 1o08(A).


 
6. Ligand: BG6 × 9
6-O-Phosphono-Beta-D-Glucopyranose
PDB codes: 2wf5(A), 2wf6(A), 2wf8(A), 2wf9(A), 3zi4(A), 5ok2(A), 6hdk(A), 6hdl(A), 6hdm(A).


 
7. Ligand: ALF × 7
Tetrafluoroaluminate ion
PDB codes: 2wf6(A), 2wf7(A), 5o6r(A), 5ok2(A), 6h8w(A), 6h8y(A), 6hdk(A).


 
8. Ligand: MGF × 6
Trifluoromagnesate
PDB codes: 2wf5(A), 5oly(A), 6h8x(A), 6h8z(A), 6hdl(A), 6hdm(A).


 
9. Ligand: ACT × 5
Acetate ion
PDB codes: 6h8x(A), 6h93(A), 6hdh(A), 6ydm(A).


 
10. Ligand: BEF × 5
Beryllium trifluoride ion
PDB codes: 2wf8(A), 2wf9(A), 2wfa(A), 5ojz(A), 6h90(A).


 
11. Ligand: B16 × 3
1,6-Di-O-Phosphono-Beta-D-Glucopyranose
PDB codes: 5o6p(A), 5ok0(A), 5ok1(A).


 
12. Ligand: EDO × 2
1,2-Ethanediol
PDB codes: 5ok2(A), 6ydj(A).


 
13. Ligand: G6P × 2
6-O-Phosphono-Alpha-D-Glucopyranose
PDB codes: 2wf9(A), 5oly(A).


 
14. Ligand: PO4 × 2
Phosphate ion
PDB codes: 6h93(A), 6h94(A).


 
15. Ligand: XGP × 2
1-O-Phosphono-Beta-D-Glucopyranose
PDB codes: 5o6r(A), 6hdg(A).


 
16. Ligand: ALF-BG6 × 1
ALF=Tetrafluoroaluminate ion, BG6=6-O-Phosphono-Beta-D-Glucopyranose.
PDB code: 6hdj(A).


 
17. Ligand: BG6-MGF × 1
BG6=6-O-Phosphono-Beta-D-Glucopyranose, MGF=Trifluoromagnesate.
PDB code: 6ydj(A).


 
18. Ligand: G1P × 1
1-O-Phosphono-Alpha-D-Glucopyranose
PDB code: 2wf8(A).


 
19. Ligand: G7P × 1
6,7-Dideoxy-7-Phosphono-Beta-D-Gluco-Heptopyranose
PDB code: 2wf7(A).


 
20. Ligand: GRX-ALF × 1
GRX=(1r)-1,5-Anhydro-1-[(S)-Fluoro(phosphono)methyl]-D- Glucitol, ALF=Tetrafluoroaluminate ion.
PDB code: 4c4t(A).

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 Cluster 2 contains 2 ligand types

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Ligand Description


 
1. Ligand: EDO × 1
1,2-Ethanediol
PDB code: 6h94(A).


 
2. Ligand: PEG × 1
Di(hydroxyethyl)ether
PDB code: 2wf8(A).

 

 Cluster 3 contains 2 ligand types

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Ligand Description


 
1. Ligand: EDO × 1
1,2-Ethanediol
PDB code: 5ok2(A).


 
2. Ligand: PEG × 1
Di(hydroxyethyl)ether
PDB code: 2wf8(A).

 

 Cluster 4 contains 2 ligand types

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Ligand Description


 
1. Ligand: EDO × 11
1,2-Ethanediol
PDB codes: 5ojz(A), 5ok2(A), 6h8x(A), 6h90(A), 6h93(A), 6hdf(A), 6hdh(A), 6hdj(A), 6hdk(A), 6hdl(A), 6hdm(A).


 
2. Ligand: PDO × 1
1,3-Propandiol
PDB code: 6ydj(A).

 

 Cluster 5 contains 2 ligand types

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Ligand Description


 
1. Ligand: EDO × 1
1,2-Ethanediol
PDB code: 5ojz(A).


 
2. Ligand: PDO × 1
1,3-Propandiol
PDB code: 6h8v(A).

 

 Cluster 6 contains 2 ligand types

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Ligand Description


 
1. Ligand: EDO × 11
1,2-Ethanediol
PDB codes: 5ojz(A), 5ok2(A), 6h8u(A), 6h8x(A), 6h90(A), 6hdf(A), 6hdg(A), 6hdh(A), 6hdj(A), 6hdk(A).


 
2. Ligand: PDO × 1
1,3-Propandiol
PDB code: 6hdm(A).

 

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